Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq135053 109 1e-21 >seq135053 Length=5356 Score = 109 bits (120), Expect = 1e-21 Identities = 212/304 (70%), Gaps = 13/304 (4%) Strand=Plus/Minus Query 106 CGCTACTCATGCCTGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTT 165 || ||||||||||| |||| || | | |||||||| || || |||| ||| |||| Sbjct 3429 CGTTACTCATGCCTACATTTTCTTTTCTAAAAACTCCACAACCCA-TCACTAGGCCGCTT 3371 Query 166 CACCACTGACACGACGCTCCCCTACC-CAACCACACAGGTTG----CCACAGCTTCGGCG 220 || | | | | ||||||||||| | | ||| || ||| |||||||| Sbjct 3370 CAGCGTCGTTAGAATGCTCCCCTACCACTAGTACAATTGTACTAATCCATAGCTTCGGTA 3311 Query 221 GATAA-CTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACG 279 ||| |||| |||| || ||||| || ||| || ||| |||||||| ||||| Sbjct 3310 -ATATGCTTATGCCCGAGTA--TTATCCATGCCAGATCGCTCGACTAGTGAGCTGTTACG 3254 Query 280 CACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACA 338 ||||| || || || | ||||||||||||| ||| |||| | |||||| |||| | || Sbjct 3253 CACTCGTTAAATGAATAGCTGCTTCCAAGCTAACATCCTAGCTGTCTAAGCAATCCAACC 3194 Query 339 TCCTTTC--CCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | ||| | ||| || | |||||| |||||||||||| || ||| | ||||||| Sbjct 3193 ACGTTTATTCAACTTAGCATATATTTAGGGACCTTAGCTGATGGTCCGGGTTCTTTCCCT 3134 Query 397 CTCG 400 |||| Sbjct 3133 CTCG 3130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175569805824