Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq135053 194 3e-47 >seq135053 Length=5356 Score = 194 bits (214), Expect = 3e-47 Identities = 217/286 (76%), Gaps = 8/286 (3%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| | ||||||||||||| | || | | |||||||| | |||||| Sbjct 921 CCCACGCTTTCGTCCATCAGCGTCAGTTAAGGCTTAGTGACCTGCCTTCGCAATTGGTGT 862 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC-- 118 ||| | ||||||| ||||||||||||||||| ||||| ||| || || | Sbjct 861 TCCGCGTAATATCTAAGCATTTCACCGCTACACTACACATTCCA---GCCACTGCAACCT 805 Query 119 -ACTCAAGAAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCT 176 |||||||| |||||| |||| |||| | || | |||||| | |||||| || Sbjct 804 CACTCAAGACTAACAGTATCAATGGCAGTTCCATCG-TTGAGCGACGGGATTTCACCACT 746 Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236 ||||| |||||||| ||||||| ||||||||||||||||||||||| || || Sbjct 745 GACTTATTAATCCGCCTACGGACCCTTTAAACCCAATAAATCCGGATAACGCTCGCACCC 686 Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 | |||||||||||||||||||||||| ||||||||| |||||||| Sbjct 685 TCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTC 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827415792371