Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq135053 221 2e-55 >seq135053 Length=5356 Score = 221 bits (244), Expect = 2e-55 Identities = 229/313 (73%), Gaps = 48/313 (15%) Strand=Plus/Minus Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70 |||| |||| |||| ||||| |||||| ||||||||| ||||| | |||| ||||| Sbjct 4893 TTCGCACTTATATGCTTTCAGTGCTTATCTCTTCCAAACGTAGCTACTCAGCAGTGCACC 4834 Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130 |||| | ||||||| | |||||||||||||| || | |||||||||||||||| | || Sbjct 4833 TGGCGGCACAACTGATACACCAGAGGTTTGTTCAACACGGTCCTCTCGTACTAGAGTCAA 4774 Query 131 CTCCTCTCAAATTTCCTACG------------------------------CC-------- 152 |||| |||||| ||| ||| || Sbjct 4773 CTCCGCTCAAACTTCTAACGATCACAACAGATAGANTACTAGAGTCAACTCCGCTCAAAC 4714 Query 153 ----------CACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGC 202 ||| || ||||| |||||||||||||| |||||||||||||||||||||| Sbjct 4713 TTCTAACGATCACAACAGATAGAGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCGC 4654 Query 203 GTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGA 262 ||||| |||||||||||||||||||||||||||||||||| || ||||||||||||| || Sbjct 4653 GTGCCACTTTAATGGGCGAACAGCCCAACCCTTGGGACCTTCTCCAGCCCCAGGATGTGA 4594 Query 263 CGAGCCGACATCG 275 ||||||||||||| Sbjct 4593 CGAGCCGACATCG 4581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779495958836