Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq135053 318 1e-84 >seq135053 Length=5356 Score = 318 bits (352), Expect = 1e-84 Identities = 313/400 (78%), Gaps = 12/400 (3%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || ||||||||||| Sbjct 644 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTATCCG 703 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || ||| |||| |||||||| |||||| || || |||||||| ||||||| | | | Sbjct 704 GATTTATTGGGTTTAAAGGGTCCGTAGGCGGATTAATAAGTCAGTGGTGAAATCCCGTCG 763 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG----AGGGGCAAGTG 188 |||||| || ||||| |||| |||| | || ||||| ||| || ||| || Sbjct 764 CTCAACGATGGAACTGCCATTGATACTGTTAGTCTTGAGTG-AGGTTGCAGTGGC---TG 819 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 |||| ||||||||||||||||||| ||||||||| | ||||||||| | |||||||| Sbjct 820 GAATGTGTAGTGTAGCGGTGAAATGCTTAGATATTACGCGGAACACCAATTGCGAAGGCA 879 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || | |||||||| |||| | |||||||||||||||| ||||||||||||| Sbjct 880 GGTCACTAAGCCTTAACTGACGCTGATGGACGAAAGCGTGGGGAGCGAACAGGATTAGAT 939 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 ||||||||||||||||| |||||||||| ||||| | ||| || | | | ||| | Sbjct 940 ACCCTGGTAGTCCACGCTGTAAACGATGGATACTTGCTGTTGG---GTTTTCGGGCT-CA 995 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || | ||| || | |||||||| |||||||||||||| Sbjct 996 TTGGCTAAGCGAAAGTTATAAGTATCCCACCTGGGGAGTA 1035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201125671168