Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29]
172,401 sequences; 399,685,866 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq104896 132 9e-29
seq91022 95.1 2e-17
>seq104896
Length=1291
Score = 132 bits (146), Expect = 9e-29
Identities = 158/212 (75%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 117 ATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGC 176
|||||||||||||||||||||||||||||||| || |||||||||||||| | | ||
Sbjct 469 ATAACAGGTCTGTGATGCCCTTAGATGTTCTGAGCTGCACGCGCGCTACAATCAAAGTAT 410
Query 177 CAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTG 236
||||| || || ||| | || | |||||||||| | | || | || || || |
Sbjct 409 CAACGTGT--ATTTCCTAGACCAAGATGTCTGGGTAAACCGCTGAACCACTTTCATGTTT 352
Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296
||||| | | | || || | || | | | ||| ||||| || |||||| | | |||||
Sbjct 351 GGGATTGTGAACTGAAACTGTT-CACATGAACTTGGAATTCCCAGTAAGTGTGAGTCATT 293
Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | ||| ||||||||||||||||| ||| ||
Sbjct 292 AACTCGCATTGATTACGTCCCTGCCTTTTTTA 261
>seq91022
Length=2973
Score = 95.1 bits (104), Expect = 2e-17
Identities = 155/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||
Sbjct 956 AGATTGAG-CAATAACAGCTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAG 898
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
| | | ||||| || || || | ||| || || ||||| | | || |
Sbjct 897 AATTCAAATATCAACGTGT--ATTTTCTAGACCGAGAGATCCTGGTAAACCGCTGAACCA 840
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
|| || || | ||||| | | | || || | || | | ||| ||||| || ||||||
Sbjct 839 CTTTCATGTTTGGGATTGTGAACTGAAACTGTT-CATATGAACTTGGAATTCCCAGTAAG 781
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325
| | ||| | || |||||||||||||||||||||
Sbjct 780 TTTGAGGCATTCACTTGCATTGATTACGTCCCTGCCCTTT 741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945567017728
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |