Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq135053 167 4e-39 >seq135053 Length=5356 Score = 167 bits (184), Expect = 4e-39 Identities = 226/311 (73%), Gaps = 12/311 (4%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 || |||||||| ||| | | |||||||||||||||| || ||||||||||| |||| Sbjct 2199 GGCGGATGCCTAGGCTTTGAGAGGCGATGAAGGACGTGATAAGCTGCGATAAGCTACGGG 2258 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTG-GG 128 ||||| ||| | || | |||||||| |||||||||||||||| |||| | | ||| | Sbjct 2259 GAGTG-GCACATACGCATTGATCCGTAGATTTCCGAATGGGGCAACCTGTCAGGTTGAAG 2317 Query 129 TCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGT 188 | | || || | | | | | | |||||||| | |||||||||||||||||| Sbjct 2318 ACCTGTCA--CTCATTTTAAATG-----AGAGCGAACGTTGGGAACTGAAACATCTAAGT 2370 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 | | ||||||||||||||| |||||||| ||||||||||||||||| ||| || Sbjct 2371 ACCAATAGGAAAAGAAATCAATTGAGATTCCGTAAGTAGTGGCGAGCGAACGCGGACTAG 2430 Query 249 CCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTG 308 || | | ||| | | ||| ||||| |||||||| | |||||| ||||| Sbjct 2431 CCCAAAAG---GCGTTATAATTTTAGAGGAATAATCTGGAAAGGTTAACCATAGGGGGTG 2487 Query 309 ATAGCCCCGTA 319 |||| || ||| Sbjct 2488 ATAGTCCTGTA 2498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916816669216