Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq135053 365 2e-98 >seq135053 Length=5356 Score = 365 bits (404), Expect = 2e-98 Identities = 425/568 (75%), Gaps = 28/568 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||| ||||||||| ||||| ||| |||||||| | | | || || Sbjct 4446 TCGACTTGTTGGTCTCACAGTCAAGCACCCTTTTGCCATTACACTCTACGCACGGTTACC 4387 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||||||| ||||||| ||||||||||| ||| ||||| | ||| |||||| Sbjct 4386 AAGCGTGCTGAGGGTACCTTTGAAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 4328 Query 121 TTAAACTACCCACCAGGCACTGTCCC-CAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 | ||||||||||||| ||| ||||| | | |||| | ||| | || ||| Sbjct 4327 TCAAACTACCCACCACGCAATGTCCTTCTTCTCAGAAGTTAGGCTCCAGATAAATAA--- 4271 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 || |||||||||||||||||||||| || |||||| | |||||| Sbjct 4270 --------AGGGTGGTATTTCAACAACGACTCCTTAAATCCTAGCGAATCTAATTCATAG 4219 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||||||||||||||||||| ||| || | |||||| |||||||||| ||||| | Sbjct 4218 TCTCCCACCTATCCTACACATTATTTACCCAAAGTCAATACGAAGCTATAGTAAAGGTTC 4159 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 | |||||||||||||| | ||| ||| ||||||| || |||| |||||||||| Sbjct 4158 ACAGGGTCTTTTCGTCCCGTTGCGATTAACCGGCATCTTCACCGATACTACAATTTCACC 4099 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | || ||| |||||||| | || ||||||| |||||||||||||||||||||||| Sbjct 4098 GAGCTCATGGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 4040 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 4039 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 3980 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCT--CTTAACCTTCCAGC 535 ||| ||| || | || | || ||| ||| |||||||||||||| Sbjct 3979 TCAGTTAAGAGCTT---------CGAGTTG-CCTCTAACCCCCTTCCTTAACCTTCCAGC 3930 Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||| ||||| || ||||| || Sbjct 3929 ACCGGGCAGGTGTCAGACCCTATACGTC 3902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699465045376