Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq135053 233 4e-59 seq26355 154 3e-35 >seq135053 Length=5356 Score = 233 bits (258), Expect = 4e-59 Identities = 242/315 (77%), Gaps = 3/315 (1%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||| ||||||||| || |||| | ||| | || || Sbjct 672 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCTTATAGTACCTTCAACTACTCA-ACTC 614 Query 61 GGAAG--GTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118 | ||| | |||||||| || ||||||||||||||| || || || || |||||||| Sbjct 613 GTAAGTAGGTTTATTCCTATAAAAAAGAAGTTTACAACCCATAAGGCCGTCTTCCTTCAC 554 Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178 || ||||||| |||| | || |||||| ||||||||||||||||||||||||||| Sbjct 553 GCGGGATGGCTGGATCAGGCGCTAACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGT 494 Query 179 AGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCC 238 |||||| ||| |||||||||||| ||| |||||||| | |||||||| |||||| Sbjct 493 AGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGTTCACCCTCTCAGGCCCCCTAAAG 434 Query 239 ATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTA 298 ||| | | || ||| ||| |||||| || |||| ||||| |||||| || ||| | Sbjct 433 ATCATCGCCTTGGTAAGCCTTTACCCTACCAACTAGCTAATCTTACGCATGCCTATCCTT 374 Query 299 CACCGATGAATCTTT 313 |||| ||||||| Sbjct 373 TCGCGATAAATCTTT 359 >seq26355 Length=15530 Score = 154 bits (170), Expect = 3e-35 Identities = 159/207 (77%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 73 TCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGT 132 ||||| | ||||| ||||||| ||| || ||||| || ||||| | ||||| Sbjct 58 TCCCTAACAAAAGTGCTTTACAACCCGAAGG-CCTTCTTCACACACGCGGTATTGCTGGA 116 Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| | | |||||| |||||||||| |||||||||||||||||||||| ||| ||| Sbjct 117 TCAGGGTTCCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 176 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252 ||||||||| ||| ||||| || | |||||||||||| ||| ||||| | || ||| Sbjct 177 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGAACAGCTAAAGATCGTCGCCTTGGT 236 Query 253 GGGCCGTTACCCCGCCTACTACCTAAT 279 |||| ||||||| || |||| ||||| Sbjct 237 AGGCCTTTACCCCACCAACTAGCTAAT 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066957378112