Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq24727 96.9 9e-16 >seq24727 Length=7596 Score = 96.9 bits (106), Expect = 9e-16 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 37733 TCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACG 37792 ||||| ||||| | ||| | || || || ||| || || ||||| || || || || Sbjct 5273 TCGGTTTTCGGGCATCAGATGCGTTTTAATTTAGCCGAAGGTTTTCCTCTTGTAACGACT 5214 Query 37793 AAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACG 37852 |||||||| ||| | || || ||||||||||| | ||||||||||| |||||||| Sbjct 5213 AAAAAATTACATCTTAAATCGATTATTTATGAACTTTTATGGTTTTTAAATGGCGATACA 5154 Query 37853 AACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAAC 37912 || || ||||| || ||||| |||| |||||| | || ||||| || || Sbjct 5153 AATATCAAATATTTAACCGATAATGGTGTGAGAATTTGGAACGAATGGGCAGATAGTAAT 5094 Query 37913 GGCGATCTCGGCCCGATTTACGG 37935 |||||| | || || |||| || Sbjct 5093 GGCGATTTAGGACCTGTTTATGG 5071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130372545708650