Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_015211.1 Length=5813 Score E Sequences producing significant alignments: (Bits) Value seq37585 86.0 2e-13 >seq37585 Length=4841 Score = 86.0 bits (94), Expect = 2e-13 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 5400 TCAAGATGGGCGGTACCGATCTTAATCATGAGATTGTCATCTTCACTACTAACGTGCATC 5459 |||| | || || || |||| |||||||||| | | ||| |||| | || || || | Sbjct 4840 TCAAAAATGGAGGGACTCATCTAAATCATGAGACTATTATCCTCACATCAAATGTTCACC 4781 Query 5460 CAGCTGGTTGGTTTCATAAATTGTGGGCTAACGACCCTAAACAATTTCACCCCTTTTGGC 5519 |||| || |||| || ||| ||||| | || | |||||||| || ||||||||| Sbjct 4780 CAGCGGGATGGTATCGTAATATGTGGCAACAAGATGCCAAACAATTCCATCCCTTTTGGA 4721 Query 5520 GCAGAGTTACTAAGGTTATGTTCTATCCGTCT 5551 | ||||||||||| || | || | ||||||| Sbjct 4720 GAAGAGTTACTAAAGTACTCTTTTTTCCGTCT 4689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18454735345770