Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq138 116 6e-24 >seq138 Length=6403 Score = 116 bits (128), Expect = 6e-24 Identities = 162/222 (73%), Gaps = 9/222 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| |||||||||| ||||| | |||| | |||||| ||||||||||| ||| | Sbjct 5977 GTACAAAGATCAGGGACGTATTCAACACAAGCTAG-TGACTCACGCTTACTAGGCATT-C 6034 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || ||| | | ||| || || | | ||||| | | || | || | ||||| Sbjct 6035 CTGGTTCATGTG-AACTTTTTCAGTCCACAATCCCAACTATGAAGCCGGTTAAGTGATTA 6093 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| |||| ||||| | | || | | | ||| |||| | ||||||| | Sbjct 6094 CCCAATCCTTTCGGACAAGGAG-----CACGCTTATGGCTTCATTGTAACACGCGTGCCG 6148 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 ||||||||||||||||||||||| |||||||||||| ||||| Sbjct 6149 CCCAGAACATCTAAGGGCATCACGGACCTGTTATTG-CTCAA 6189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751826886545