Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9900 181 2e-43 seq19920 104 4e-20 seq23536 89.7 8e-16 seq138 87.8 3e-15 >seq9900 Length=193 Score = 181 bits (200), Expect = 2e-43 Identities = 111/118 (94%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||| |||||||| | ||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 152 GCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACC 93 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 92 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 35 >seq19920 Length=114 Score = 104 bits (114), Expect = 4e-20 Identities = 60/62 (97%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 53 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCAATCCACGAACTAAGAACGGCCATGC 112 Query 219 AC 220 || Sbjct 113 AC 114 >seq23536 Length=101 Score = 89.7 bits (98), Expect = 8e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 43 GTCTCGTTAGTTATCGGAATTAACCAGACAAATCAATCCACGGACTAAGAACGGCCATG 101 >seq138 Length=6403 Score = 87.8 bits (96), Expect = 3e-15 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||| | ||||||| |||||||||||||||||||||||| |||||||||||| ||| Sbjct 6129 TCATTGTAACACGCGTGCCGCCCAGAACATCTAAGGGCATCACGGACCTGTTATTG-CTC 6187 Query 76 AAACTTCCATT-GGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 || || |||| ||| || || ||| ||| | |||| || Sbjct 6188 AA--TTTCATTCTGCTAGACGCAAATTGTCTTTTTAAGCAG 6226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796616573403