Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq23376 178 4e-42 seq19184 152 2e-34 seq18521 107 6e-21 >seq23376 Length=101 Score = 178 bits (196), Expect = 4e-42 Identities = 100/101 (99%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTC 383 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTC 60 Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 101 >seq19184 Length=120 Score = 152 bits (168), Expect = 2e-34 Identities = 96/104 (92%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 270 ACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329 |||| | | |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 17 ACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAGTGTTGCCAAGC 76 Query 330 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 77 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 120 >seq18521 Length=125 Score = 107 bits (118), Expect = 6e-21 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 |||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||| Sbjct 125 TTTACCCGCGCTTGCTTGACTTTCTTCACGTTGACATTCAGAGCACTGGGAAGAAATCAC 66 Query 522 ATTGCGTCAACA 533 |||| ||||||| Sbjct 65 ATTGTGTCAACA 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634811427424