Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clunio_20marinus_20[genbank_20GCA_5F900005825.1_202016-11-28] 23,763 sequences; 85,491,412 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq18339 154 4e-35 seq22572 87.8 5e-15 seq19461 82.4 2e-13 seq21944 77.0 1e-11 >seq18339 Length=126 Score = 154 bits (170), Expect = 4e-35 Identities = 111/127 (87%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 113 TAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA 172 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct 126 TAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTAGCAA 67 Query 173 CCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAT 232 | ||||||| || |||| |||||||| ||||||||||||||||| ||||||| || | | Sbjct 66 CAATGGTAGTCCTCTATACTACCATC-AAAGTTGATAGGGCAGACATTTGAAAGATCTGT 8 Query 233 CGCCGGC 239 || |||| Sbjct 7 CGTCGGC 1 >seq22572 Length=101 Score = 87.8 bits (96), Expect = 5e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | |||||| ||||| || | ||| |||||||||| ||||||||||||||||| Sbjct 81 TATTTTTCGTCACTCCCTCCTCGAGCTGGGGGTGGGTAATTTACGCGCCTGCTGCCTTCC 22 Query 103 TTGGATGTGGTAGCCGTTTCT 123 || ||||| |||||| ||||| Sbjct 21 TTAGATGTAGTAGCCATTTCT 1 >seq19461 Length=118 Score = 82.4 bits (90), Expect = 2e-13 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG-TACTATCAAATAAACGATAACT 410 |||||||||| || |||| |||||||| ||| | | || ||| || ||| ||| || Sbjct 1 TAGCTCTAGATTTTCCACAGTTATCCAAGTACTGGGAATATGATCTAAGAAATTATAGCT 60 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469 | | || |||||| || || |||||||| ||| | | | || ||||||||||||||||| Sbjct 61 GTTATACTGAGCCTTTTGCGGTTTCACTTTATTG-TAGTTTGTACTTAGACATGCATGG 118 >seq21944 Length=101 Score = 77.0 bits (84), Expect = 1e-11 Identities = 70/86 (81%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||| || || |||||||| ||| | | | || ||||||||||||||||| |||| ||| Sbjct 101 GAGCCTTTTGCGGTTTCACTTTATTG-TAGTTTGTACTTAGACATGCATGGTTTAACCTT 43 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||| ||| ||| | |||||| || Sbjct 42 TGAGACGAGCGTAT-ATTACTGGTAG 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510041083648