Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq733 372 6e-101 seq81 161 2e-37 >seq733 Length=1081 Score = 372 bits (412), Expect = 6e-101 Identities = 228/241 (95%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 78 CTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAA 137 ||||||||||||||||||| || | |||||||| |||||||||||||||||||||||||| Sbjct 729 CTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACATTAGCATGGAATAA 670 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 669 TGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 610 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 GACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 550 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 |||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| Sbjct 549 TAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GAACGAAAGTTAGGG 491 Query 318 G 318 | Sbjct 490 G 490 Score = 78.8 bits (86), Expect = 2e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTG 57 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| Sbjct 988 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTG 936 >seq81 Length=2730 Score = 161 bits (178), Expect = 2e-37 Identities = 189/250 (76%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTAGCATG 131 |||||||||| ||||||||||| | ||||||||| || || ||||| | ||||| Sbjct 2241 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTAATGCCTGAATATTTGTGCATG 2182 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT--TGGTTTCTAGGACC-GCCGTAATG 188 ||||||| ||| ||||| | | |||||||||| | |||||| ||| | | |||||| Sbjct 2181 GAATAATGGAAGAGGACAT-CTGTTCTATTTTCTATTGGTTTTTAGATCAAGATGTAATG 2123 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 |||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 2122 ATTAATAGAAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCG 2063 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 |||||||||| |||||||| || |||| ||||||||||||||||| |||||| Sbjct 2062 TCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGA 2004 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 2003 AAGTTAGAGG 1994 Score = 116 bits (128), Expect = 7e-24 Identities = 179/247 (72%), Gaps = 9/247 (4%) Strand=Plus/Minus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCATGGAA 134 |||||| ||||||||||| | ||||||||| | ||| ||||| | |||||| | Sbjct 2730 TTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGA 2671 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTA 192 |||| |||| ||| | | ||||| ||| ||||||| || | | |||||||||| Sbjct 2670 TAATGAAATAAGACCT-CTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATGATTA 2612 Query 193 ATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 2611 ATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCG 2552 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||| |||| |||||||| || |||| |||||||||||||||| ||||||||| Sbjct 2551 TAAGACTGACTAAAGCGAAAGCATTTGCCAAATATGTTTTCATTAATCA-AGAACGAAAG 2493 Query 312 TTAGGGG 318 |||| || Sbjct 2492 TTAGAGG 2486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915184148736