Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq733 241 1e-61 seq81 86.0 6e-15 >seq733 Length=1081 Score = 241 bits (266), Expect = 1e-61 Identities = 159/175 (91%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 17 CTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAATAA 76 ||||||||||||||||| | || | |||||||| ||||||||||||||| |||||||||| Sbjct 729 CTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACATTAGCATGGAATAA 670 Query 77 TAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATAC 136 | ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| Sbjct 669 TGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG-CCGTAATGATTAATAG 611 Query 137 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 ||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 610 GGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 556 >seq81 Length=2730 Score = 86.0 bits (94), Expect = 6e-15 Identities = 127/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT---GCTCGAATACATTACCATG 70 |||||||||| ||||||||| | | ||||||||| || || ||||| | |||| Sbjct 2241 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTAATGCCTGAATATTTGTGCATG 2182 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTA--GGTTTCTAGGACCGCCCGTAATG 128 ||||||| ||| ||||| | | |||||||||| || ||||| ||| | |||||| Sbjct 2181 GAATAATGGAAGAGGACAT-CTGTTCTATTTTCTATTGGTTTTTAGATCAAGATGTAATG 2123 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || |||| ||| ||||| | |||||| | | |||||||||||||||| Sbjct 2122 ATTAATAGAAGCAGTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGA 2066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511991409280