Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1179 107 6e-21 >seq1179 Length=1032 Score = 107 bits (118), Expect = 6e-21 Identities = 125/170 (74%), Gaps = 13/170 (8%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 170 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 111 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 110 TAAACCGAAATTTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 51 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328 || ||||||||||||||| ||||||||||||||||||| ||| ||||| Sbjct 50 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAG 1 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 475 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 416 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 415 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 369 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 966 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTTCGTTATT 907 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||||||||| || |||| Sbjct 906 ATTTGAAAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCAGTGTC 860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635171678336