Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coboldia_20fuscipes_20[genbank_20GCA_5F001014335.1_202015-05-28] 1,732 sequences; 98,759,061 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq204 277 1e-69 seq1651 259 4e-64 seq1361 210 2e-49 >seq204 Length=47217 Score = 277 bits (306), Expect = 1e-69 Identities = 908/1399 (65%), Gaps = 43/1399 (3%) Strand=Plus/Plus Query 65081 ACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTG 65140 || |||||||| || | |||||| || | ||| ||||| | || ||||| || || || Sbjct 14747 ACTGTGAACTGAATGGGATTAGCGGCTGGCTTAGTCCTTAAGTAATACATTCCAGTTTTA 14806 Query 65141 AGGCCAGCACGCCAAGCATAGAAATGCATCGA--TGATAATTTTGCATAATTCGGCTCGG 65198 || ||||| ||| ||||||||||| || || | || || ||| || |||||| | Sbjct 14807 AGTCCAGCTTTCCATGCATAGAAATGAATTGAACTCATTATATTG--TATGTCGGCTGTG 14864 Query 65199 CCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGT 65258 ||||||| ||||| || || ||||| ||||||||| || ||||||||| || ||||| | Sbjct 14865 CCACATGAATATTGAATGATTGACTTTGATCGATGAAAGCACCACGATCCGCTGCCATAT 14924 Query 65259 CAA----TGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 || || | ||| || |||||||| || || || || | ||||| | Sbjct 14925 TAATTGTTGTTTTAACG----GAAATCTCCCAAACTGTTTTATATAACTCACGTATATTC 14980 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||||||| | || || | || | || ||| | || | || ||| ||| Sbjct 14981 TTTGGAATTTTTTCGATCTTTTGAATGGATCCATAATTAGCCACTATCTCATTTTTCATT 15040 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || ||| | | || ||| | |||| | | || ||| |||| | |||||| Sbjct 15041 TCTTCATCCCAGATATTTAATTCGGTGAGATCACGCAACATATGAGGATTAACTACTTGG 15100 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || ||||| ||||| || ||| || || || || || |||||||||||| Sbjct 15101 AATTCACCAGACAGAACACGGCGATTATAAATATTTGATGTATATGGCTCAAAGGATTCA 15160 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 | |||||||||||||| || || || ||||| ||||| ||||| | ||| | || ||| Sbjct 15161 TTATTGCCTAGAATTTGAGCTGTTGAGGCAGTCGGCATTGGAGCCAACAATAGAGAATTT 15220 Query 65555 CGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 || | ||| ||| | | ||| || |||||| |||| ||||||| || | Sbjct 15221 CGTACTCCATGTTGAGT--AATTTTAGCTTTCAATTCAGCCCAATTCCACA----ATTCT 15274 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 | || | | ||||||||| | ||| || |||| | || | || || Sbjct 15275 GTTGGAGTTTTA--TTCCACATATCATATTGGAGAATTCCTTTGCTAACGGGACTGCCTT 15332 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 || | || || || | || || | || ||| || | ||| | || || Sbjct 15333 TAAATGTTTCATAAGGACCAAGTTTCTCAGCCAATTCACAACTAGCCTCCAAAGCACCAT 15392 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | || ||||| || ||||| || |||| | | | ||||| |||||||| || | Sbjct 15393 AGTAGATGGTTTCAAAAATTTGTTGATTTAATAATTGCGCCTCTGGACTCTCGTATGG-A 15451 Query 65793 TA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | ||| || | || | || || | ||||||||||||||||| | |||||||||| Sbjct 15452 TAGCGCATTAGTATGAATGCATCAGCTAATCCTTGAACTCCAATACCAACGGGACGATGA 15511 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 || ||| || ||| || | ||||| || || ||||| ||||| || || |||| Sbjct 15512 CGTTTATTTGATCGTTCTGCTTGAGGTAATGGATAATAATTTATATCAATTATTTTATTC 15571 Query 65912 AAATTGCGTGTCACCACATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTTAG 65969 ||||| | ||| || || | ||| || ||||| | ||||| |||||| Sbjct 15572 AAATTTCTTGTGAC--AATCTTTGTTACTTCCTTCAATTTCTTAAAATC-AAATGT---- 15624 Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 ||||| | | | |||||| || | |||| || || | ||||| | Sbjct 15625 -ACGAT---TATT------CTTCACAAATTTATTCAATGCAATTGACGCTAAATTGCATA 15674 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089 | || || || || | || ||| || |||||||| || |||||||| ||||| |||| Sbjct 15675 CCGCAATTTCATCTTTATCGCAATATTCAACAATTTCTGTACACAGATTGCTGCATCGTA 15734 Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149 | || |||| |||||| ||||| || | |||||| | ||| || || | ||| || | Sbjct 15735 TTGTTCCCAGATTCTGCTGATTTGATTTCCTATTGCAAGAATCTTTATATAGCATATATG 15794 Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209 | || ||||| || ||||| |||||| ||| | ||| | || || || | || Sbjct 15795 GTGTTCCGGTTTCTACTTGTGACTCATAGATTTTATACCATAAGGCACGGGCATCAACTT 15854 Query 66210 TACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCC 66269 ||| || | || | | |||||| | || || | || ||| ||||||| Sbjct 15855 GTCGTTTAGCACGTCCCTCACTTTCGTATTTCTCATATAATATTTTAAAGTCATCACCCC 15914 Query 66270 ATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTT 66329 || || | || | ||||| | ||| |||||||| | ||| | ||||| || Sbjct 15915 ATGAATCAAAAAGTCCGGGACATTCGTGCGGACACATTAAACTCCATTTGCCATCAGCTT 15974 Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389 | ||||| |||||||| ||| || ||||| | || || || ||||| || || |||| Sbjct 15975 CAACACGTTCCATAAATAAATCTGGAATCCATAAAGCATAAAATAGATCCCGAGCACGTT 16034 Query 66390 GCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 | ||| |||| || || ||| | |||||||| || || || || ||||| | Sbjct 16035 CTTTCTCCGCGCCGGTGTTCTTTTTCAAATTAAGGAACTCGAAAATATCAGCGTGCCAAG 16094 Query 66450 GTTCCAGGTAGATGGCGAA 66468 |||| || || || || || Sbjct 16095 GTTCAAGATAAATAGCAAA 16113 >seq1651 Length=647375 Score = 259 bits (286), Expect = 4e-64 Identities = 940/1443 (65%), Gaps = 65/1443 (5%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| || || || |||||||| ||||| | || || | | ||| ||||| |||||| Sbjct 382056 TCGACAGTAAATTGAATCGCATTCGCAGCTGGTTTTGTTCGCAAATAATACATACCGGTC 382115 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-AT-TCGGCT 65195 ||||| || ||||||||||||||| || || | || || ||| || |||| | Sbjct 382116 TTGAGACCCATTTTCCAAGCATAGAAATGGATAGAAC-TCATCTT-CATGTATGTCGGTT 382173 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||||||| ||||| || || ||||||||||| || | ||| || || || |||| Sbjct 382174 GTGCCACATGAATATTAAATGATTGACTCTGATCAATAAATGCACCGCGGTCCGCTGCCA 382233 Query 65256 TGTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAG----GCGACGTAC 65310 | | ||| | || || ||||||||||||| ||||| || || || |||| | | Sbjct 382234 TTTTAATAGT-CGTTTTCACCGATATCTCCCAAACGGTTTTATA-AGTTTCGCGAATTGC 382291 Query 65311 CTCAATTGGAAT-CTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369 ||| ||||| || | ||| | ||| || |||||| | ||| | | |||| | Sbjct 382292 CTCC---GGAATACTTGT-AATATTCTGCACAGAACCATAATTTGCCACCAACTGATTTC 382347 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGA 65429 ||| || ||| ||| ||| | || | | | || || ||| |||| | | Sbjct 382348 TCATGTCTTCGTTCCATAAATTCAATTTAATCAATTCGTTCACTAAATGAGGATTCACCA 382407 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | || |||||||| || || |||||||| ||| || || |||||| |||||||| | Sbjct 382408 CCTGAAACTCGCCAGATAGCACACGACGTGTATAAATATTTGACGTGTAAGGTTCAAACG 382467 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 ||||| | || || |||||||| || || || ||||||||||| ||||| | ||| || | Sbjct 382468 ATTCATTATTCCCAAGAATTTGTGCCGTCGAAGCAGTTGGCATCGGAGCAATCAATAACG 382527 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCG--G 65607 | || || | || ||| | ||| || | ||| || ||| ||||||| | | Sbjct 382528 AATTGCGAACACCATTCTTGCTAATCTTTTCTTTCAACGAGTTCCAATTCCACAGAGCAG 382587 Query 65608 TTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGA 65667 || | | || ||| |||||||| |||| | || |||| | || Sbjct 382588 TTGGTGTT--ACTTCC------CACATATCAAACTGCAATATCCCTTTACTCACTGGACT 382639 Query 65668 ACCGAGGAAAC-TATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTG 65726 || | | || | || || ||| | | | || | || |||||| | || | | Sbjct 382640 TCCT-GCATACGTCTCATAGGTTCCATATTTTTCTGCCAATTCACAGCTTGCTTCTAAAG 382698 Query 65727 CGGCAAAATAAATGGTCTCGAAAATGCGTCGAT--TAAGTTCACGTGCCTCATCGCTCTC 65784 | | |||||||||| || || || || || | | || |||| | || || || Sbjct 382699 CCCCGTAATAAATGGTTTCAAATATC--TCCATGTTCAATTTTTGTGCTTTTTCACTTTC 382756 Query 65785 GTA-CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 ||| | ||| | ||||| | |||| || |||| |||||||| ||||| || || | Sbjct 382757 GTATCCGCACTTC-ATCAGCATAAAAACATCAGCCAATCCTTGAACCCCAATCCCAATTG 382815 Query 65844 GACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903 | ||||| | ||| || ||| || || ||| | || |||||||| |||||||| | Sbjct 382816 GTCGATGTCTACGATTCGATCGTTCTGCTTCTGGTTCCGGATAGTAATTAATATCGATTA 382875 Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAAT 65963 | ||||||||| ||||| ||| | | ||| || | |||| || Sbjct 382876 TTTTATTCAAATTTATTGTCAACACTTTGGCCATA---------TGCT-----TCAACAT 382921 Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 || | | | || | | | | ||||| || || | |||| || || | | Sbjct 382922 ATTAAAGTC-ATAAGTATTCTCATCTACCACGAATTTATTCAATGCAATCGACGCTAAAT 382980 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 | || ||||| || || || || | ||| || | ||||||||||||| ||| || | Sbjct 382981 TACATACAGCAATTTCATCTCGATCACAATATTCCATGATTTCGGTGCACAAATTGCTAC 383040 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 |||| || || ||||||||||||||||| || || ||||| ||||| || |||| || Sbjct 383041 AGCGAATTGTACCCAAATTCTGTTGATTTGATTTACGGTTGCACGCATCTTTATACAACA 383100 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 | ||||| || ||||| || ||||| || ||| || | ||||| | | || || | Sbjct 383101 TATACGGCGTACCGGTTTCTACTTGTGATTCATAAATTTTATACCAAATATCTCGAGCTT 383160 Query 66204 TCAC-CGTAC---GTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259 |||| || | || || | |||| ||| || | || || | | |||| Sbjct 383161 TCACTTGTTCCTTATAGCGTTTTTCCTT----TTCATACTTTTGATATAATTCATCGA-- 383214 Query 66260 GATTCA---CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 ||||| ||||| || | |||| ||||||| |||||||||||||| ||| Sbjct 383215 -ATTCATTTCCCCAACAATCAAATAGACCAGGACACTCATGTGGACACATCAGACTCCAC 383273 Query 66317 TCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376 || |||| |||||| || |||||||| |||||| ||||| || || || || | | Sbjct 383274 ACATCATCAGCTTCTACTCGCTTCATAAATAAATCAGGAATCCAAAGAGCATAAAACAAA 383333 Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 || | ||| || | | ||||| || ||| || || ||| | || || || || Sbjct 383334 TCTCTTGCACGATCATTCTCAACACCAGTG-TTCTTCTTCAAATTTAGAAAATCTTTTAT 383392 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || |||||||||||||| | ||| || || | || || |||||| |||| ||| Sbjct 383393 ATCAGCATGCCATGGTTCTAAGTAAATAGCCATTGATCCAGGTCGTTTGTTTCCACTTTG 383452 Query 66496 GTC 66498 || Sbjct 383453 ATC 383455 >seq1361 Length=478162 Score = 210 bits (232), Expect = 2e-49 Identities = 360/519 (69%), Gaps = 5/519 (1%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || || || || ||| || ||| ||| || || ||||| || ||| Sbjct 112721 TTATTTAATGCAATTGAAACAATGCCGTGCGTAAAGAAGAAGGCAGACTGGGCGTTGAAT 112780 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | |||| ||| || ||||| |||||||| | | |||||||||| || || Sbjct 112781 TGGATATCAAGTAAAACAGCAACATTCGGTGAACGTATAATTGCATTTGCGGCTGTTGAA 112840 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 ||| ||||||||||||| ||||| |||| |||||| | ||||||||||| | ||| Sbjct 112841 GGTATATTTTTCAGTGGCAGTTTTGCATCAATATTTTGGCTAAAGAAACGTGGCTTAATG 112900 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 || || |||||||| || || || || |||||||| || || | |||||||| ||| Sbjct 112901 CCGGGACTGACCTTTTCAAACGAATTAATTTCACGCGATGAAGGTTTACATTGTGACTTT 112960 Query 61636 GCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAG 61695 ||| ||| | ||||| | || |||| | || | |||| |||| | || Sbjct 112961 GCTTGTTTAATGTTCAAGC---ATTTGGTACAAAAACCAACAAAGGACTGTGTTGTAGAA 113017 Query 61696 ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCA 61755 || | || || || || | || ||||| |||||| | || || | | || || Sbjct 113018 ATAATCCGAGACGCCGTTAAAATAGAACAAGAATTTTTAACAGAGTCACTACCTGTAGAT 113077 Query 61756 CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 | | || ||||||||| ||||||| || || || |||||||| || || ||| || Sbjct 113078 TTGTTAGGTATGAATTGTAATTTAATGTCACAATACATAGAATTTGTAGCAGATCGTTTG 113137 Query 61816 -TTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGA 61874 ||||| || |||||||| || || |||||| ||| ||| |||||| || ||||| Sbjct 113138 CTTGGT-GAATTGGGTATTGAGAAAATATATAATTCGACAAATCCATTTCCATTTATGGA 113196 Query 61875 CATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 || || | || ||||| |||||||| || || || Sbjct 113197 ACAAATATCATTAGAAGGCAAAACGAATTTCTTTGAAAA 113235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559607836480