Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq36404 129 2e-27 seq103838 80.6 1e-12 >seq36404 Length=1681 Score = 129 bits (142), Expect = 2e-27 Identities = 106/129 (82%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||||||||||||||| ||||| ||| |||| ||| | Sbjct 532 GAGCATATATGCTGTGACCCGAAAGATGGTGAACTATACCTGATCAGGTAGAAGTCAGGG 591 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||||||| Sbjct 592 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGGGTA 651 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 652 TAGGGGCGA 660 >seq103838 Length=4575 Score = 80.6 bits (88), Expect = 1e-12 Identities = 99/134 (74%), Gaps = 10/134 (7%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || | |||||||||||| ||||||||| |||||| || |||| |||| Sbjct 434 GAGCATATATGCTATGACCCGAAAGATAGTGAACTATACCTGAACGGGTAGAAGTAAGAG 375 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA--TCGT-CAAAT---- 667 |||| | |||| | ||| | | ||||| |||||||||||| |||| ||||| Sbjct 374 GAAAAAATCATGGAAGGTCGAAACATTTCTGACGTGCAAATCGATTTCGTGCAAATGTCA 315 Query 668 ---TTGGGTATAGG 678 ||||||||||| Sbjct 314 GAATTGGGTATAGG 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075467250350