Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq87369 295 2e-77 seq92394 134 4e-29 seq42003 113 1e-22 seq52877 95.1 4e-17 >seq87369 Length=4602 Score = 295 bits (326), Expect = 2e-77 Identities = 220/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||| ||||||||||| | ||| | | ||| | || ||| | |||||||||||||| Sbjct 3111 TTACTCTACACCTCTTATGTC--TCCTTAAATT---ACCAGACTAGAGCTCAACAGGGTC 3057 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||| | |||| ||| |||||||||| | |||||||||||||||||||||||||| Sbjct 3056 TTCTTTTCTCGCTAATTATTCCAAGCCCGTCCTTTTGGCTGTGGTTTCGCTAGATAGTAG 2997 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 | | ||||||| | ||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 2996 ACACGGACAGTAGAAATCTCGGTAATCCATTCATGAGCGTCACTAATTAGATGACGAGGC 2937 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| Sbjct 2936 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTAACCAGCGCTTAAATGAATT 2877 Query 484 TCTTCACTTTGACATT 499 |||||||||||||||| Sbjct 2876 TCTTCACTTTGACATT 2861 >seq92394 Length=5291 Score = 134 bits (148), Expect = 4e-29 Identities = 97/112 (87%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 |||||||||||| ||| | ||||| ||||||||| |||| |||||||||||||||||| Sbjct 942 TCTTTCCCCGCTAATTATTCAAAGCCGGTTCCCTTGACTGTCGTTTCGCTAGATAGTAGA 1001 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 || |||||| |||||||| || ||||||| |||||||||||| |||||||| Sbjct 1002 GAGCGACAGTAGGAATCTCATTTATCCATTAATGCGCGTCACTGATTAGATG 1053 >seq42003 Length=4014 Score = 113 bits (124), Expect = 1e-22 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 || ||||||| |||||| ||||||| ||| |||||| | |||||||||||||||||| Sbjct 472 GATAGTCATATTTACTCTCGCCGTTAACCAGCGCTTACATATATTTCTTCACTTTGACAT 531 Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||||||||||||| |||||| ||||||| Sbjct 532 TCATAGCACTGGGCAGAAATTACATTGTGTCAACA 566 >seq52877 Length=4611 Score = 95.1 bits (104), Expect = 4e-17 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498 |||| |||||||||||||| ||||| ||| |||||| |||||||||||| |||||||| Sbjct 1962 GAGAATCATAGTTACTCCCACCGTTAACCAGCGCTTAAATGAATTTCTTCATTTTGACAT 1903 Query 499 TCAGAGCACTGGGCAGA 515 ||| ||||||| ||||| Sbjct 1902 TCATAGCACTGAGCAGA 1886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1631744544416