Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_010179.2 Length=40881 Score E Sequences producing significant alignments: (Bits) Value seq205685 125 2e-24 >seq205685 Length=35797 Score = 125 bits (138), Expect = 2e-24 Identities = 295/438 (67%), Gaps = 22/438 (5%) Strand=Plus/Minus Query 16850 TTGGTGCTATTCGTGGTATGACTTCTTACGGTGCTTACATTAACGAAGCATCACTAGCAA 16909 |||| |||||| | |||||||| ||| ||||||||| | |||||||| || ||||| | Sbjct 21181 TTGGAGCTATTAGAGGTATGACAGCTTTCGGTGCTTATGTAAACGAAGCGTCGCTAGCCA 21122 Query 16910 CGCATGAAGTTTTTCAAGAAATTGTACAGCGTTGTTCTG---TTGGATCAGCAAGAATTA 16966 || ||||| ||| |||||||||| ||||||||||| ||| ||||| || Sbjct 21121 AGCGAGAAGTGTTTGCAGAAATTGTATCGCGTTGTTCTGGAACTGG---TGCAAGGATAT 21065 Query 16967 TCTGTGACACAAACCCTGATATTCCTACACACTGGCTTAAGACTGATTACATAGATAATC 17026 | | || |||||||| |||| || ||| ||| | || | || ||||| ||||||| Sbjct 21064 TAGGCGATACAAACCCAGATAACCCAGAACATTGGTTAAAAAAGGAATACATTGATAATC 21005 Query 17027 ATGATCCTAAGGCTAGGATTAAGGCATTTAGCTTTACCATCGACGACAACACTTTTCTTG 17086 || ||| | ||||| | ||| ||| | || || ||||| ||| | | Sbjct 21004 -CGA--GTAA---AAATATTAAATCGTTTCATTTTGAATTAGATGATAACACATTTTTGG 20951 Query 17087 CAAAAGATTATGTTGAAGCTCTAAAGGCTGCTACACCAAGAGGGATGTTTTATGATCGTT 17146 | || |||| ||| |||| | ||||| ||||| ||||||||||| ||||| Sbjct 20950 CTGAACGTTATCGAGAAAACATAAAAGAAGCTACCCCAAGCGGGATGTTTTACGATCGGG 20891 Query 17147 CAATACTTGGTCAATGGGTGACTGGTGAAGGTATTGTTTACCAAGATTTTAATGCTA--- 17203 ||| || | ||||| ||| |||||| | ||||| | ||||||| || | | Sbjct 20890 ACATAAAAGGCCTGTGGGTATCTGCCGAAGGTGTGGTTTATCGAGATTTTGATTCAAGTG 20831 Query 17204 -ACACTATGGTTATTGATGATAAAAATATTCCTGATGGTCTTAA-TTACTATTGTGGCGT 17261 ||| |||| | | || || ||| | || | | || || |||||||| || Sbjct 20830 TACATTATGTGCAAT-CTG----AATCATTGCCGAAATTATCAACATATTATTGTGGTGT 20776 Query 17262 TGACTGGGGATTTGAACA 17279 ||||||||||| |||||| Sbjct 20775 TGACTGGGGATATGAACA 20758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130369628831222