Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq210017 333 2e-86 seq105373 251 6e-62 seq139863 250 2e-61 >seq210017 Length=1697 Score = 333 bits (368), Expect = 2e-86 Identities = 1013/1562 (65%), Gaps = 25/1562 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || ||||| ||||| | || || || | ||| ||||| || || Sbjct 42 ATCTACTGTGAACTGAATAGCATTTGCAGCAGGTTTTGTTCTTAAATAATACATTCCAGT 101 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || || ||||| ||||||||| ||||| || || | ||||| |||| ||||| || Sbjct 102 TTTTAGTCCAGCTTTCCAAGCATAAAAATGAATTGAAGTCAATTTACCATAGTTCGGTTC 161 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 |||||||| ||||| || || ||||| ||||| || || |||||||| ||| Sbjct 162 AGCCACATGAATATTAAATGATTGACTTTGATCAATAAAAGCTCCACGATCACAAGCATA 221 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 || || ||| | | ||||| ||||| || ||||| |||| | || | Sbjct 222 ATCTATTGTACTCCTAACAGATATTTCCCATACCGTCTTATACAAATCTCTTATATTTTG 281 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||||| ||||| | || | || |||||| || ||| || || ||| Sbjct 282 AGGAATCTTTTCAATATTTTGAATAGACCCACGATTTGAAATGATTAAGTTTTTCATATC 341 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||||||| | | || |||||| || | ||| ||| |||| | | |||||| Sbjct 342 ATCATCCCACAAATCTAGTTCTGTAAGATCTTTTAACAAATGATGATTAACAATTTGGAA 401 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 || || || | || || || ||| || || || ||| |||||||| |||||| | Sbjct 402 TTCACCAGATAAAACCCGGCGATTATATATATTTGATGTGTATGGTTCAAATGATTCATT 461 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 ||| || | |||||| || || ||||| |||||||| || || | || || || ||||| Sbjct 462 GTTACCCAAAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAATTAATAACGAATTTCG 521 Query 65557 CAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614 | || ||| | |||| || | ||||| ||| | ||| | ||| | | Sbjct 522 AACACCATGTTGAG--CAATTTTATCCTTTAATTCAGACCAATCCCATAAA--TTTGTTG 577 Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674 || | |||||| || | ||| | | || |||| | || || || Sbjct 578 G-GATTTTATT---CCACATGTCATATTGTAAAATACCCTTACTTACAGGGGAGCCTTCA 633 Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAA 65734 | | || || ||| || | || | || ||| || | || | ||| || | Sbjct 634 TATGTTTCATAAGGACCCAATTCTTGAGCTAATTCACAACTAGCTTCTAAGGCGCCATAG 693 Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794 ||||| || || ||||| || | || | | || || | ||| || || || | | Sbjct 694 TAAATAGTTTCAAAAATTTGTTGGTTCAATAATTTAGCTTCTTTGCTTTCATAAGGAAAA 753 Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 | ||| || | ||||| || || || || || || ||||| || || || | ||| || Sbjct 754 CGCATTAGTATAAAAGCATCAGCAAGTCCCTGTACCCCAATTCCAATTGGTCTATGCCGT 813 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 ||||| || | | || || || ||||| || ||||| | ||| ||||| ||| ||| Sbjct 814 AAATTTGATTTTTTAGCTTCGGGGACAGGATAATAATTTACATCTATAATTTTATTTAAA 873 Query 65915 TTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGA 65974 || || | | | | | || |||| | ||| ||||| |||| Sbjct 874 TTTTTCGTTATAATTTTTGAAACATGTTTTAATTTATTGAAGTCAAAGGTTTTAT----- 928 Query 65975 TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034 || || | || ||| | ||| || | ||| || | || || ||||| Sbjct 929 ---------CCTGAGAA-ACGAACATATTAAGAGCTATAGACGCCAAATTACATACAGCA 978 Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094 || || || || | | |||||| |||||||| ||||| | ||||||||| || || || Sbjct 979 ATTTCATCTGGCGAAGAATACTCCACAATTTCAGTGCATAAATTACTGCAACGAATTGTT 1038 Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154 |||| ||| || ||||| || || | ||| || ||||| ||||| | |||||| || || Sbjct 1039 CCCACATTTTGCTGATTGCTTTTTCTATTACAAGCATCTTTGTATAGCATGTAAGGTGTT 1098 Query 66155 CCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGT 66214 || |||||||| || |||||||| || || |||||| | ||||||| | | Sbjct 1099 CCTGTCTCAACCTGTGACTCAATAATTGCAAACCAAAGTGTTTGTGCCTTTATTTTTTTA 1158 Query 66215 ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT 66274 || ||||| | ||| || | || | | |||||| ||||||||||| Sbjct 1159 TTAGCTCTACCCTCTTTTTCATATTTAGTATATAATTCTTCGAATTCCTCACCCCATACA 1218 Query 66275 TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334 ||| | || ||| ||||| ||||| ||||| | ||||| ||| | || ||| || Sbjct 1219 TCGTGTAAACCTGGGCACTTATGTGGGCACATTAAAGACCATTCATCGTCGGATTCAACT 1278 Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 | |||||| | ||| |||||||| | || || || ||||| | |||||| ||| Sbjct 1279 CTTTTCATAAACAAATCTGGTATCCACAAAGCATAAAACAGATCTCTGGCTCGTGTTTCC 1338 Query 66395 TCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCC 66454 || | || ||| || ||||| | || |||| || || | |||||||||||| Sbjct 1339 TCTTTTCCAGTATTCTTCTTTAAGTCTAAAAATTCAAGTATATCAGAATGCCATGGTTCT 1398 Query 66455 AGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACA 66514 || || || || || | || | ||| ||||||||||| ||||| ||||| ||| Sbjct 1399 AGATATATTGCAAAAGCTCCTGGCCTTTTATTTCCACCTTGGTCAACGTATCGAGCAACA 1458 Query 66515 TTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 || ||||| || | |||||| ||||| | |||||||| ||||| || || | || Sbjct 1459 TTATTGAAAACTCTCAACATAGGTACTAAGCCGTTAGAAACCCCATTTGTACCAGCAATT 1518 Query 66575 GGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG 66634 | | |||| ||| || ||| |||||||| | |||||| ||||| || | ||| || Sbjct 1519 GTTGTTCCTGTTGCACGAATACAATGAACATTTAAACCAATGCCACCAGCTGACTTTGAA 1578 Query 66635 AT 66636 || Sbjct 1579 AT 1580 >seq105373 Length=2707 Score = 251 bits (278), Expect = 6e-62 Identities = 591/892 (66%), Gaps = 19/892 (2%) Strand=Plus/Plus Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794 ||||| || || ||||| || |||| | | | || || | || || || || | Sbjct 375 TAAATTGTTTCAAAAATCTGTTGATTCAATAATCTAGCTTCTTTACTTTCATAAGGATAA 434 Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 | || |||| ||||| ||| |||| |||||||||||||| || || || ||||| | Sbjct 435 CGCAATAGGATAAAAGCGTCCGCCAATCCTTGAACTCCAATTCCAATTGGTCGATGCCTA 494 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 ||||| || | | ||||| || | ||||| || || | ||| ||||| ||||||| Sbjct 495 AAATTAGATTTTTTAGCCTCTGGAAGTGGGTAATAGTTTACATCTATAATTTTATTCAAA 554 Query 65915 TTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGA 65974 || | ||| | | | | | | ||||| |||||||| | | | | Sbjct 555 TTTCTTGTTATAATTTTGGAAACATTTTTCAATTCAATAAAATCAAACTTT------CCA 608 Query 65975 TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034 | || | ||||||| | || |||| |||||| | ||||| || || Sbjct 609 TTTGGT---------AACACAAACATATTTAGAGCAATAGATGCCAAATTGCAAACGGCA 659 Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094 || || || | | | ||| || |||||||| || |||| ||| ||||| || || || Sbjct 660 ATTTCATCTGAACAAGAATATTCCACAATTTCTGTACACAAATTGCTGCAACGAATTGTT 719 Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154 || | ||| | ||||||||| || || ||||| | || |||||||| || || ||| | Sbjct 720 CCAAGATTTTTTTGATTACTTTTACGGTTGCAAGTGTCTTTGTACATTATATATGGATTA 779 Query 66155 CCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTAC-- 66212 || || |||||||| | |||| || ||| | || || ||||| || | Sbjct 780 CCAGTTTCAACTTGAGCTTCAACTATACTAAACCACAACGCTCGAGCCTTAACTATTTTA 839 Query 66213 GTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATA 66272 ||| |||||||||| | ||| || | |||||| || | || ||| |||||||| | Sbjct 840 GTA--GCCCTACCTTCGTTTTCATATTTTTCGTACAGATTTTTGAATTCATCACCCCAGA 897 Query 66273 CTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTA 66332 | ||| ||| || |||||||||||||||||||| | ||||||||||||| | ||||| Sbjct 898 CATCGAACAAACCCGGACACTTGTGTGGACACATTAAAGACCAATCACCATTATTTTCTA 957 Query 66333 CACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCT 66392 || |||||||| ||| || ||||| | | ||||||||||| | ||| || | Sbjct 958 AGCGTTCCATAAATAAATCTGGAATCCATAACCCATAGAAGAGATCTCTTGCACGAATTT 1017 Query 66393 CCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTT 66452 | || | ||| |||||| ||| || | || ||||| || || |||||||| |||| Sbjct 1018 CTTCTTTTCCGGTATTTTTTTTCAAATCTAAAAATTCAAATATATCTGCATGCCACGGTT 1077 Query 66453 CCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGA 66512 | | || || || || || || | ||| ||||||| | || | | || | Sbjct 1078 CTAAATAAATTGCAAATGAACCGGGTCTTTTATTAACACCTTGTCCAACAAATCTTGCTA 1137 Query 66513 CATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGA 66572 ||| ||||| ||||| | ||| || || | ||||| || || || | || || | | Sbjct 1138 AATTATTGAATACACGTAGCATTGGAACAATTCCGTTTGACTTTCCGTCTGTTCCAGCAA 1197 Query 66573 TGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 | | | ||| ||||||||| |||| ||| | |||||| ||||| || Sbjct 1198 TTGAAGTCCCTTTTGCCCGTATGCAATGAATATTTAAACCAATTCCACCAGC 1249 >seq139863 Length=2592 Score = 250 bits (276), Expect = 2e-61 Identities = 490/724 (68%), Gaps = 3/724 (0%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || || |||||||| ||||| || ||||| || || || |||| |||| Sbjct 2019 AGGCTGAAGCATCTTTTTGGACGGTTGAGGAAGTTGATTTATCAAAGGATATGACGGACT 1960 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 || | ||| | || |||| |||||||| |||||| || || || ||||| | Sbjct 1959 GGAACAAATTAACTTCTGGAGAACGTCATTTCATATCACATGTTTTAGCATTTTTTGCTG 1900 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 |||| || ||||| || || || ||| | | |||||||| || || || ||||| Sbjct 1899 CTTCAGATGGTATAGTTAACGAAAATCTTGTTGAACGTTTTAGTCAAGAAGTTCAAGTAA 1840 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | || ||||||||||| || || || || || || ||||| ||||| || || || |||| Sbjct 1839 CTGAAGCGCGTTGTTTTTATGGATTTCAAATAGCTATGGAAAATGTTCATTCCGAAATGT 1780 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 |||| || | || ||||| || || | ||| | ||| | || | || |||| Sbjct 1779 ACAGCATTTTAATTGATACATATATAAAGGATCCAAAAGAAAGAGATTTCCTTTTTAATG 1720 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCA 61465 | || || || |||| || || ||||| |||||||| || ||||||| || | Sbjct 1719 CAATTGAAACATTACCATGTGTTAAAAAAAAAGCTGATTGGGCATTAGATTGGATAACAA 1660 Query 61466 GTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525 ||| | | |||| | ||| ||||| | | || ||||| | || || || |||| | Sbjct 1659 GTAAATCAGCTAATTATGGAGAACGTATTATTGCTTTTGCAGCAGTTGAAGGAATATTCT 1600 Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585 | ||||| ||||| |||| |||||||| || |||||||| |||||||| || | | Sbjct 1599 TTAGTGGTAGTTTTGCATCAATATTTTGGTTAAAAAAACGTGGCCTTATGCCAGGATTAA 1540 Query 61586 CCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGC 61645 | || ||||| | || ||| | || || || | |||||||||||||| ||| Sbjct 1539 CATTTTCAAATGAACTAATTTCAAGAGATGAAGGATTACATTGTGATTTTGCATGTTTAA 1480 Query 61646 TATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTG 61705 | || |||| || | | | || | || | | ||| ||| | || Sbjct 1479 TGTTTAAAC---ATTTAATACAAAAACCAAGTAAAGAAAGAATTATTGAAATTATATCTG 1423 Query 61706 AGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCA 61765 | || || | || ||||| |||||| | |||||||| || || || | || || | Sbjct 1422 AAGCAGTGAAAATTGAACAAGAATTTTTAACTGACGCATTACCTGTAAATTTAATTGGTA 1363 Query 61766 TGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATT 61825 ||||||| |||||||||| ||||||||||||||||| ||||| | ||| || | Sbjct 1362 TGAATTGCAATTTAATGTCGCAATATATTGAATTTGTTGCTGACCGATTATTGAGAGAAT 1303 Query 61826 TGGG 61829 |||| Sbjct 1302 TGGG 1299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396544093060880