Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq121975 178 1e-40 >seq121975 Length=4353 Score = 178 bits (196), Expect = 1e-40 Identities = 422/630 (67%), Gaps = 22/630 (3%) Strand=Plus/Plus Query 7941 AGATGAGTGGCATCGACTCCCGCTGTCAAAGTGTTTTGAGATTCCAGATGTTGTTGATCC 8000 ||||| ||||||| ||| || || | | ||||| |||||||||||||| |||| || Sbjct 61 AGATGTCTGGCATCTACTACCTCTAACTCAATGTTTCGAGATTCCAGATGTGATTGACCC 120 Query 8001 AAGCTTAA-TTTATGCAGACAAAAGTCATTCAGTATGCAGGTCTGAAATTATTGAACAT- 8058 ||| | ||| | | |||||||||||||| |||| | | | || | |||| Sbjct 121 G-GCTGACCTTTTTTCGGACAAAAGTCATTC--TATGGACCT---AGATAAC---ACATG 171 Query 8059 ---ATAAAGTCAAACCCTATGACACCAATTCCTTCGAAAAAAGTCTTAGAGACATTTATA 8115 | ||| || | | | ||||||| | ||||| || ||| ||||| || Sbjct 172 CGCAGCAAGCCAGGCACCAGAACACCAA------CAAAAAAGGTATTAACAACATTACTA 225 Query 8116 AATACTCCTGCTACAAACTGGAAAGAATTCCTAACAGAAGTAAATGACAATGGGCTAGAT 8175 || |||| || || ||| ||| || | | || | ||||| ||| |||| Sbjct 226 GGAACCCCTGATATAATATGGCCAGACTTTGTGAAGAAAATTAATGATGTTGGATTAGAC 285 Query 8176 ATGGAGCATCTTGTAATCGGGCTGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGA 8235 || | || |||| || | |||| ||| ||| ||||||| |||| ||| || Sbjct 286 TTGAATTCACTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGA 345 Query 8236 TTCTTCGCTCTTATGTCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATT 8295 | |||||| | ||||| ||| || ||| |||||| || | | || || || || Sbjct 346 TATTTCGCTTTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATC 405 Query 8296 AAATTACATTTCGTCCCTCTCTTCTCCGGATTAACTATGGCAGATGATCTAAACACAGTT 8355 ||| ||||| || || || || |||||||| |||||||| ||| |||| ||| | Sbjct 406 AAACAACATTATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTA 465 Query 8356 GTTaaaaaaaTGCTCGATACATCTAATGGACAAGGGTTAGACGTTTACGACTATATCACA 8415 || || ||| | || || |||| || ||||| ||||| ||||||||| || Sbjct 466 ACAAAGAAGATGATGGAAACTTCTATGGGTCAAGGTATAGACAATTACGACTACATTTGT 525 Query 8416 ATGGCAAATCATATAGATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAAT 8475 || ||||||||| ||||||| ||||||||||||| |||| ||| ||| || || ||| Sbjct 526 ATAGCAAATCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAAT 585 Query 8476 CCTGTCTTCACTGTCATGGGTCAGTTTCTAGGATATCCA-AGCCTCATAACAAGAACACA 8534 ||||| |||| || ||||| || ||||| || | | | | | | |||||||| || Sbjct 586 CCTGTATTCAAAGTGATGGGACAATTTCTTGG-TGCCGAGAATTTATTTACAAGAACGCA 644 Query 8535 TGAGTTCTTTGAAAAAAGCTTGATCTATTA 8564 ||| ||||||| | || || ||||| || Sbjct 645 TGAAATCTTTGAGAGGAGTTTAATCTACTA 674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41728193574512