Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_033055.1 Length=12513 Score E Sequences producing significant alignments: (Bits) Value seq137928 123 2e-24 seq164634 95.1 1e-15 >seq137928 Length=4071 Score = 123 bits (136), Expect = 2e-24 Identities = 286/422 (68%), Gaps = 22/422 (5%) Strand=Plus/Plus Query 8032 GGAGGAATGGAAGGAATGAGACAAAAGCTATGGACTATAATAACAATTGCAATTATCAAG 8091 ||||| | || |||||| || |||| |||||| || |||||||| |||| ||| Sbjct 1506 GGAGGTTTCGAGGGAATGGCGCAGAAGCGATGGACAATTATAACAATATCAATAATCCGA 1565 Query 8092 TATTCAGCAGAAACATTAA-ATCTCAGAATTACAGTTATTGGACAAGGAGATAACCAAGT 8150 ||| || || | ||| | || | | |||| || | |||||||| ||||| ||||| Sbjct 1566 TATATTGCTGAT-CTTTACCAACTTAAAGTTACTATTCTCGGACAAGGTGATAATCAAGT 1624 Query 8151 AGTGTTAATTAAATATAGAGAGGATCAGATCGA---TAAAAA-ATCAGAATTGAGAAATA 8206 ||| |||| | ||||| ||||| || | || |||| | || | || | ||| Sbjct 1625 AGTCCTAATAAGATATACAGAGGCACAAAGAGAACGTAAAGATATTATAA----GGAATG 1680 Query 8207 GATTTTTACAATTGCTTAAGACCAATTTTTTAGCAGTAAACCTTAAGTTAAAATT--ATC 8264 ||| ||| || |||| |||||||| ||| | | || || ||| | | | Sbjct 1681 AATTCTTAGAAGA-CTTATA--CAATTTTTCTTCAG---AGTTGAATTTGAAACTTAAGC 1734 Query 8265 ----AGAAACATGGATCTCCAAGAACTTATTTGAGTATGGTAAAGTAAGGTATTATAAAG 8320 |||||||||| |||| || |||| || ||||| || ||| || | | | Sbjct 1735 CGAAAGAAACATGGTATTCCAGAAAACTATTCGAATATGGCAAGCAAAGATACTTCGAGG 1794 Query 8321 GTGAAGCAATTAGTCAGACAACAAAGAAGATCTCAAGATTAATACCTGATATTAATGATG 8380 |||||||||| |||||| |||||| ||| |||| | |||||||| |||||||| |||| Sbjct 1795 GTGAAGCAATAAGTCAGGGAACAAAAAAGGCCTCACGCTTAATACCAGATATTAACGATG 1854 Query 8381 GTATCAGCTCATTTATGTCCTCTCTCAGTACAATTAATACCATTACTGAGTCAGCCGCAA 8440 || | |||| ||| | | | | | || || |||||||| || || ||||| ||||| Sbjct 1855 GTCTGTGCTCGTTTTCGACATGTTTAAGCACCATTAATACTATCACCGAGTCCATCGCAA 1914 Query 8441 AG 8442 || Sbjct 1915 AG 1916 >seq164634 Length=2669 Score = 95.1 bits (104), Expect = 1e-15 Identities = 275/413 (67%), Gaps = 24/413 (6%) Strand=Plus/Plus Query 8041 GAAGGAATGAGACAAAAGCTATGGACTATAATAACAATTGCAATTATCAAGTATTCAGCA 8100 ||||| ||| ||| |||| ||||||||| |||||||| |||| ||| ||| || Sbjct 388 GAAGGGATGGCACAGAAGCGATGGACTATTATAACAATATCAATAATCCGATATATCGCT 447 Query 8101 GAAA--CATTAAATCTCAGAATTACAGTTATTGGACAAGGAGATAACCAAGTAGTGTTAA 8158 || ||| || | | || |||| || | |||||||| || || || ||||| || | Sbjct 448 GATCTTCATCAACT-TAAGG-TTACTATTCTCGGACAAGGTGACAATCAGGTAGTTTTGA 505 Query 8159 TTAAATATAGAGAGGATCAGATCGA---TAAAAA-ATCAGAATTGAGAAATAGATTTTTA 8214 | | ||||| || | |||| || |||| | || | || | ||| ||| ||| Sbjct 506 TAAGATATACTGAAGCACAGAGAGAACGTAAAGATATTATAA----GGAATGAATTCTTA 561 Query 8215 CAATTGCTTAAGACCAATTTTTTAGCAGTAAACCTTAAGTTAAAATT--ATC----AGAA 8268 || |||| ||||| | ||||| | || || ||||| | | | |||| Sbjct 562 GAAGA-CTTATAT--AATTTCTCAGCAGAA---CTGAATTTAAAGCTTAAGCCGAAAGAA 615 Query 8269 ACATGGATCTCCAAGAACTTATTTGAGTATGGTAAAGTAAGGTATTATAAAGGTGAAGCA 8328 || ||| ||||| || ||||| || ||||| || ||| || | |||| | |||| Sbjct 616 ACCTGGTATTCCAAAAAATTATTCGAATATGGAAAGCAAAGATACTTCGAAGGCGCAGCA 675 Query 8329 ATTAGTCAGACAACAAAGAAGATCTCAAGATTAATACCTGATATTAATGATGGTATCAGC 8388 || |||||| ||| || ||| ||| | |||||||| || |||||||||||| | || Sbjct 676 ATAAGTCAGGGAACCAAAAAGGCTTCACGTTTAATACCAGACATTAATGATGGTTTGTGC 735 Query 8389 TCATTTATGTCCTCTCTCAGTACAATTAATACCATTACTGAGTCAGCCGCAAA 8441 || ||| | | | | || || || ||||| || || ||||| |||||| Sbjct 736 TCGTTTTCTACATGTTTAAGCACTATCAATACTATCACCGAGTCCATCGCAAA 788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39831482320476