Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq121975 123 2e-24 >seq121975 Length=4353 Score = 123 bits (136), Expect = 2e-24 Identities = 249/364 (68%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 6208 CTGATCATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCA 6267 ||||| || ||||||||||||||||| |||||| | ||| | || || | || || Sbjct 295 CTGATAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCT 354 Query 6268 CTTATGTCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACAC 6327 | ||||| ||||| | ||| ||| ||||| | | ||||| | |||||| ||| Sbjct 355 TTAATGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACAT 414 Query 6328 TTTGTACCTCTGTTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAA 6387 | |||||| || || || || | || |||||||||||||| | || ||| || Sbjct 415 TATGTACCACTATTTAAGGGATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAG 474 Query 6388 ATTTTAGAGAATACAGAGGGACAAGG-AGAAACAGGGTATGAGAATATCACGGTTTCAAA 6446 || | || | | | ||| ||||| | | ||| || || | || | |||| Sbjct 475 ATGATGGAAACTTCTATGGGTCAAGGTATAGACA-ATTACGACTACATTTGTATAGCAAA 533 Query 6447 CCATATAGATTACGAGAAATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTT 6506 ||| |||||||| ||||||||| ||| | || || ||||| |||||||||||||| || Sbjct 534 TCATTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATT 593 Query 6507 TGATGTAATGGGGAAATTCCTTGGCTACCCCAACCTTATCT-CACGTACCCATGAAATAT 6565 | || ||||| |||| ||||| | || | |||| | || | || |||||||| | Sbjct 594 CAAAGTGATGGGACAATTTCTTGG-TGCCGAGAATTTATTTACAAGAACGCATGAAATCT 652 Query 6566 TCGA 6569 | || Sbjct 653 TTGA 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35464289260092