Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_033701.1 Length=11743 Score E Sequences producing significant alignments: (Bits) Value seq121975 131 1e-26 >seq121975 Length=4353 Score = 131 bits (144), Expect = 1e-26 Identities = 267/392 (68%), Gaps = 6/392 (2%) Strand=Plus/Plus Query 6720 AAAAGAGAGAGAAGTTAAAAGGATTGGTCGAtttttttCACTAATGTCTTGGGA-ACTAC 6778 |||||| ||||| | |||| |||| ||| ||| | ||||||| ||||| |||| Sbjct 315 AAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCCTGGGAGACTA- 373 Query 6779 GAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTTTTGTACCTTTGTTCTCAG 6838 || |||||||| ||| || |||||||| ||| | || |||||| | || | Sbjct 374 GATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATTTAAGG 433 Query 6839 GTTTAACAATGGCCGACGATTACAATTCAGTAATTAAGAAAATGTTGGACCGGGCGACAG 6898 | ||||| ||||| ||||||| ||| || ||| ||||| ||| |||| | | | Sbjct 434 GATTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTCTATGG 493 Query 6899 GTCAAGGTGAATCTGATTACCAGTATATAACATTTGCAAATCATTTTGACTATTCGAAAT 6958 |||||||| | ||||| | || || | ||||||||||| || || ||||||| Sbjct 494 GTCAAGGTATAGACAATTACGACTACATTTGTATAGCAAATCATTTAGATTACTCGAAAT 553 Query 6959 GGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCTTCCTTGTCATGGGTAAATTTT 7018 |||| || | ||| || | |||||| | || || ||| || ||||| ||||| Sbjct 554 GGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACAATTTC 613 Query 7019 TAGGACTACC--GAAACTCTTTGTAAGAACCCACGAGTTTTTTGAGAAGAGCTGGATTTA 7076 | || | || ||| | ||| |||||| || || | ||||||| ||| | || || Sbjct 614 TTGG--TGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTTAATCTA 671 Query 7077 CTATAACGATCGAGGAGATTTAATTTCTGTGC 7108 |||| | |||| |||||||| ||||||| Sbjct 672 CTATCCAGCAAGAGGTGATTTAATGTCTGTGC 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37373340027716