Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq121975 141 7e-30 >seq121975 Length=4353 Score = 141 bits (156), Expect = 7e-30 Identities = 252/364 (69%), Gaps = 8/364 (2%) Strand=Plus/Plus Query 6484 AAAGAAAGAGAGGTCAAACGGGTTGGACGATATTTTTCATTGATGTCCTGGAACCTAAGA 6543 |||||| |||| | ||| | ||| ||||||| | || ||||||||| | ||| Sbjct 316 AAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAATGTCCTGGGAGACTAGA 375 Query 6544 CTATATTTTGTTTTAACTGAATTTCTTATTAAACGATATTACGTTCCCTTATTTAGTGGA 6603 || ||||| |||| || | | || |||| | |||| || || |||||| ||| Sbjct 376 TGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATGTACCACTATTTAAGGGA 435 Query 6604 TTGACAATGGCAGATGATTTTAACACCGTTATTCGAAAGTTACTAGATCGGACCATGGGA 6663 || || |||||||| ||||| || || | | ||| | | || | ||||| Sbjct 436 TTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATGATGGAAACTTCTATGGGT 495 Query 6664 CAAGGAGGCCTGACA--TACGAATATATCACATTAGCCAATCATTTTGATTACTCCAAAT 6721 ||||| |||| ||||| || || |||| |||||||| |||||||| |||| Sbjct 496 CAAGGTATA--GACAATTACGACTACATTTGTATAGCAAATCATTTAGATTACTCGAAAT 553 Query 6722 GGAATAACACTCAACGAGGAAAAGCAAATAATCCTGTCTTTAAAGTTATGGGTCAATTTT 6781 ||||||||| ||| || | |||| ||||||||||| || ||||| ||||| |||||| Sbjct 554 GGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAAAGTGATGGGACAATTTC 613 Query 6782 TGGGGTTGCC--CAATCTCTTTGTAAGGACTCATGAATTCTTTGAGCAAAGTTTGATCTA 6839 | || |||| ||| | ||| ||| || |||||| |||||||| ||||| ||||| Sbjct 614 TTGG--TGCCGAGAATTTATTTACAAGAACGCATGAAATCTTTGAGAGGAGTTTAATCTA 671 Query 6840 TTAT 6843 ||| Sbjct 672 CTAT 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37335031316660