Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq121975 114 1e-21 >seq121975 Length=4353 Score = 114 bits (126), Expect = 1e-21 Identities = 248/364 (68%), Gaps = 8/364 (2%) Strand=Plus/Plus Query 6231 TAATAGGTCTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGGAGGTTTTTTGCTTTAA 6290 ||||||| ||||||| |||||| ||||| | ||| | | || || | ||| ||||||| Sbjct 299 TAATAGGATTAAGAGCAAAAGAACGAGAAATGAAAATTGCTGGTAGATATTTCGCTTTAA 358 Query 6291 TGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCATAAAGAAGTATTTCG 6350 |||| |||||| ||| || ||||| ||| |||| | || || | ||| | Sbjct 359 TGTCCTGGGAGACTAGATGTTACTTTGTCTTAATCGAGTACTTGATCAAACAACATTATG 418 Query 6351 TTCCGTTACT-AAGAGACTTAACAATGGCAGACGACTTGAATGATGTCATAAGTAAAATG 6409 | || || | ||| || ||||| ||||||||||| || ||| | | || || ||| Sbjct 419 TACCACTATTTAAGGGA-TTAACCATGGCAGACGATTTAAATACATTAACAAAGAAGATG 477 Query 6410 TTGTCTAGTACATCAGGACAAGGGTTGGATGACTACTCAGTAG-TATCTATTTCTAACCA 6468 || | | | || ||||| | || | ||| | || | | ||| | || || Sbjct 478 ATGGAAACTTCTATGGGTCAAGGTATAGACAATTACG-ACTACATTTGTATAGCAAATCA 536 Query 6469 CTTAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATCCTGTATTCAG 6528 ||||||||| ||||||||| || | || || || ||| | ||| |||||||||||| Sbjct 537 TTTAGATTACTCGAAATGGAATAACAATCAGAGAAAAGAAGCCAATAATCCTGTATTCAA 596 Query 6529 AGTGATGGGTCAATTTTTGGGAAAGCC--TAACTTATTCACTAGGACACATGAGTTTTTC 6586 ||||||||| |||||| | || ||| || ||||| || || || ||||| | || Sbjct 597 AGTGATGGGACAATTTCTTGG--TGCCGAGAATTTATTTACAAGAACGCATGAAATCTTT 654 Query 6587 GAGA 6590 |||| Sbjct 655 GAGA 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39943216061056