Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1121 183 6e-44 seq683 163 5e-38 >seq1121 Length=25326 Score = 183 bits (202), Expect = 6e-44 Identities = 195/251 (78%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCA 129 || ||||||||||||||||||||||| ||||||||||| | || ||||| ||| Sbjct 14513 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGTACCGCCTGAATAATGGTGCA 14572 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAAT 187 ||||||||| ||||| ||| | || |||||||||||||||| | ||| || | ||| Sbjct 14573 TGGAATAATGGAATAAGACCT-CGTCTCTATTTTGTTGGTTT-TCGGAAAACGAGGAAAT 14630 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| || |||||| | ||||| | |||||||||||||||||| Sbjct 14631 GATTAAGAGGGACAGACGGGGGCATTCGTATTGCGACGCTAGAGGTGAAATTCTTGGACC 14690 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 ||||| ||||||||||||||| || ||||| |||||||||||||||| ||||| Sbjct 14691 GTCGCAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACG 14749 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 14750 AAAGTTAGAGG 14760 >seq683 Length=188875 Score = 163 bits (180), Expect = 5e-38 Identities = 210/285 (74%), Gaps = 10/285 (4%) Strand=Plus/Minus Query 38 CATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGT 97 ||||| ||| || ||||||| | | ||| | || ||||||||||| |||||||||||| Sbjct 143769 CATGCTCTTTACCGGGTGTGGAGATGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGT 143710 Query 98 TCAAAGCAGGCCTTT----GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCG 153 | ||||||||| ||| | |||||| |||||||||||| ||||||||| | || Sbjct 143709 TTAAAGCAGGCTTTTTAAGTCCTGAATACCAGTGCATGGAATAATGGAATAGGACCT-CG 143651 Query 154 GTTCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||||||||||| | ||| ||| |||||||| ||| |||| || ||||| Sbjct 143650 GTTCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATCAATTGGGACAGCTGGGGGC 143592 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || | |||| |||| |||| || | ||||| || || | Sbjct 143591 ATTCGTATTGCGACGTAAAAGGTTAAATCCTTGAATCGTTGCAAGACAGACAGAACCGGA 143532 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 ||| || |||| |||||||||||||||| |||| |||||||| Sbjct 143531 AGCATTTGCCAAAAATGTTTTCATTAATCA-AGAACAAAAGTTAG 143488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915150167360