Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1121 91.5 7e-17 seq683 84.2 1e-14 seq292 84.2 1e-14 >seq1121 Length=25326 Score = 91.5 bits (100), Expect = 7e-17 Identities = 84/103 (82%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| |||||||| |||||||||||| |||| |||||||| |||||| Sbjct 9569 GGAAAAGAAACCAACAGGGATTCCCCTAGTAACGGCGAGCGAACGGGGAAGAGTCCAGCG 9628 Query 61 CCGAATCCC-CGCCCCGCGGTGGGGCGC-GGGACATGTGGCGT 101 ||||||||| || || | || ||| |||| ||||||||| Sbjct 9629 CCGAATCCCGCGTTCCTC---TGGACGCAGGGAAATGTGGCGT 9668 >seq683 Length=188875 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| || |||| ||||||| ||||||| ||||||||||| Sbjct 159740 GGAAAAGAAACTAACAAGGATTTCCCAAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGCA 159681 Query 61 CCGAATCCC 69 | ||||||| Sbjct 159680 CTGAATCCC 159672 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| || |||| ||||||| || ||| ||||||||||| Sbjct 83595 GGAAAAGAAACTAACAAGGATTTCCCAAGTAGCGGCGAGCGATCAGAAAAGAGCCCAGCA 83654 Query 61 CCGAATCCC 69 | ||||||| Sbjct 83655 CTGAATCCC 83663 >seq292 Length=446083 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| || |||| ||||||| ||||||| ||||||||||| Sbjct 106295 GGAAAAGAAACTAACAAGGATTTCCCAAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGCA 106354 Query 61 CCGAATCCC 69 | ||||||| Sbjct 106355 CTGAATCCC 106363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230388238800