Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq170 87.8 1e-15 seq128 78.8 6e-13 >seq170 Length=926609 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| || |||||||| |||||||||| Sbjct 695728 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCAACGGGCGGTGTGTACAAAG 695784 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 695785 GGCAGGGACGTAAT-CAACGCGAGCT 695809 >seq128 Length=1156761 Score = 78.8 bits (86), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| |||||||||| ||||||||| Sbjct 442816 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGATGTGTACAAAA 442760 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || ||||||| Sbjct 442759 GGCAGGGACGTAAT-TAATGCAAGCT 442735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300784645100