Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1121 100 3e-19 seq683 89.7 6e-16 >seq1121 Length=25326 Score = 100 bits (110), Expect = 3e-19 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| |||| | ||| ||||| |||||||||||| ||||| |||| Sbjct 14613 AAACCAACAAAATAGAGACG-AGGTCTTATTCCATTATTCCATGCACCATTATTCAGGCG 14555 Query 70 -TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || ||||||||||| |||||||||||| |||| ||||| || Sbjct 14554 GTACGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 14513 >seq683 Length=188875 Score = 89.7 bits (98), Expect = 6e-16 Identities = 95/124 (77%), Gaps = 5/124 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| |||||| || Sbjct 143633 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACTGGTATTCAGGAC 143691 Query 70 T----AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 | ||||||||||| ||||||||||||| |||| ||||| || | || | || || Sbjct 143692 TTAAAAAGCCTGCTTTAAACACTCTAATTTGTTCAAAGTAAACGTACCGGCCCATCTCCA 143751 Query 126 CACC 129 |||| Sbjct 143752 CACC 143755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595168604130