Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq683 107 2e-21 seq1121 91.5 2e-16 >seq683 Length=188875 Score = 107 bits (118), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT----GCTCGAATACATTA 65 || ||||||||||| ||||||||| ||| ||||||||| ||| | |||||| Sbjct 143736 ACGTTTACTTTGAACAAATTAGAGTGTTTAAAGCAGGCTTTTTAAGTCCTGAATACCAGT 143677 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 143676 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGG 143619 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| ||| ||| || ||||| | ||||| || |||||| |||| |||| Sbjct 143618 TAATGATCAATTGGGACAGCTGGGGGCATTCGTATTGCGACGTAAAAGGTTAAATCCTTG 143559 Query 184 GAT 186 || Sbjct 143558 AAT 143556 >seq1121 Length=25326 Score = 91.5 bits (100), Expect = 2e-16 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| | ||||||||||| | || ||||| || Sbjct 14513 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGTACCGCCTGAATAATGGTGCA 14572 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||||| ||| | || |||||||||| ||||| | ||| | | ||| Sbjct 14573 TGGAATAATGGAATAAGACCT-CGTCTCTATTTTGTTGGTTT-TCGGAAAACGAGGAAAT 14630 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| || | ||| || |||||| | ||||| | | |||||||||||||||| Sbjct 14631 GATTAAGAGGGACAGACGGGGGCATTCGTATTGCGACGCTAGAGGTGAAATTCTTGGA 14688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511972992800