Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1121 468 2e-129 seq887 351 3e-94 seq683 143 8e-32 seq520 122 3e-25 >seq1121 Length=25326 Score = 468 bits (518), Expect = 2e-129 Identities = 417/514 (81%), Gaps = 11/514 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||| |||||||||||| | || ||| |||| || |||| ||||| | ||||||||| Sbjct 14291 GTACCCATTCCAATTACGGGGCCTCAATAGAGTCCCGTATTGTTATTTTTCGTCACTACC 14232 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14231 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 14172 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 14171 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTAACGACCATGGT 14112 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || |||||||||||||||||||| |||||| | ||||| || | ||||||| Sbjct 14111 AGGCGCATAACCTACCATCGAAAGTTGATAAGGCAGACACTTGAAAGATACGTCGCCGGT 14052 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCA----AGGAGCCCCGAAGGG 293 | || || |||||| | | ||||||| || |||||| | | || ||| Sbjct 14051 GCTAGACCGTGCGATCAGCTGAAAGTTATCCAGAGTCACCACCATTTGCGGGCCTAAGCC 13992 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCT-TCCGAA-GTCGGGGTTTTTA-GCATGTA 350 || | | | || |||||||||| | | | | ||||| ||||| | | | | ||||||| Sbjct 13991 CGATTGGTCTTGGTCTAATAAATGCGCTCGTCCCCGAAGGTCGGAGCTCTGATGCATGTA 13932 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||||| |||||||| |||| || |||| || || ||| ||||| Sbjct 13931 TTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAAAGTACAGTCTAAGGAACCGTAACT 13872 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||||||||||||||||||| ||||||| || | | || | ||| ||||||||||||| Sbjct 13871 GATTTAATGAGCCATTCGCGGTTTCACCTTA-ATTTGGCATGCACTGAGACATGCATGGC 13813 Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||| Sbjct 13812 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 13779 >seq887 Length=28448 Score = 351 bits (388), Expect = 3e-94 Identities = 410/552 (74%), Gaps = 50/552 (9%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 11832 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 11891 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11892 TCCCCGTGCCGGAAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 11951 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||| ||||||||||||||| |||||| |||| |||||||||||| |||||||| Sbjct 11952 TTCTCAGGATCCCTCTCCGGAATCAAACCCTGATTCTCCGTTACCCGTTACAACCATGGT 12011 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 | || | | ||||||| | |||||||| |||||| ||||||| || | ||||||| Sbjct 12012 AAGCGCAGAACTTACCATCAACAGTTGATAAGGCAGACATTTGAAGGATGCGTCGCCGGT 12071 Query 240 TCAAGG-CCATGCGAT--TCGTTAAGTTATTATGAATCACCA----------------AG 280 | ||| || |||||| | |||||||| || |||||| | Sbjct 12072 ACGAGGACCGTGCGATCAGCCAAAAGTTATTCAGAGTCACCACAAACTTTTACGATGGAC 12131 Query 281 GAG-------CCCCGAAGG-----------GCGTTGGTTTTTTATCTAATAAATACACCC 322 ||| | ||| | || | | |||| ||||||| || | || Sbjct 12132 GAGAGAACGCGCGTGAACGCGTTCCCGCCACCGATTGGTTTTGATCTAATGAAAGCGTCC 12191 Query 323 CT----TCCGAAGTCGGG---GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 375 || || |||||| | || |||||||||||||||||||||||||| ||||| Sbjct 12192 CTTTCATCTCTGGTCGGGACTCTGGTTTGCATGTATTAGCTCTAGAATTACCACAGTTAT 12251 Query 376 CCATGTA---GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432 ||| ||| || ||||| ||| || ||| |||||||||| |||||||||||||| || Sbjct 12252 CCAAGTAAATGT-GGGTACGATCTAAGGAACCATAACTGATTAAATGAGCCATTCGCGGT 12310 Query 433 TTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||| || | | || | ||| ||||||||||||||||||||||||||||||||||| Sbjct 12311 TTCAACTTA-ATTTGGCATGCACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 12369 Query 493 GACTACTGGCAG 504 |||||||||||| Sbjct 12370 GACTACTGGCAG 12381 >seq683 Length=188875 Score = 143 bits (158), Expect = 8e-32 Identities = 134/167 (80%), Gaps = 5/167 (3%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAA 397 || |||||| ||||||||||||||||||| |||||||| ||| ||| ||||| ||| Sbjct 144205 TTTGCATGTCTTAGCTCTAGAATTACCACAGTTATCCAAGTAAACGTA-GGTACCATCTT 144263 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 | ||| |||||| ||| ||| ||||| ||| ||||| | | || | || | ||| Sbjct 144264 AGGAACCATAACTAATTAAATAAGCCACTCGTGGTTTCTCCTT-TATTTGGCATGCACTG 144322 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct 144323 AGACATGCATGGCTTAATCTTTAAGACAATCATATGACTACTGGCAG 144369 Score = 131 bits (144), Expect = 5e-28 Identities = 128/162 (79%), Gaps = 5/162 (3%) Strand=Plus/Minus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAATAA 401 ||||||||| ||||||| | ||||| | |||||| ||| ||||| ||| ||| | | Sbjct 30810 CATGTATTACCTCTAGACTCACCACAGCTATCCAAGTAAATGTAAG-TACGATCTACGGA 30752 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || |||||||||||||||||| |||| ||||||| | || | || || ||| |||| Sbjct 30751 ACTATAACTGATTTAATGAGCTGTTCGTGGTTTCACCAT-TATTTGGCATACACTAAGAC 30693 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 |||||||||||| | ||| ||||||||||| |||||||||| Sbjct 30692 ATGCATGGCTTACTATTTAAGACAAGCATACAACTACTGGCA 30651 >seq520 Length=294945 Score = 122 bits (134), Expect = 3e-25 Identities = 131/167 (78%), Gaps = 5/167 (3%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGG-TACTATCAAA 398 || ||||||||||| ||||| ||||| || ||||| || || | | || ||| ||| || Sbjct 166825 TTCGCATGTATTAGGTCTAGTATTACTACAGTTATTCAAGTTAATGTGGATACGATCTAA 166766 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT-TATACTT 457 || | ||||||| ||||| |||| ||||||||| || || || ||| | | || Sbjct 166765 GAAGCCATAACTGGTTTAAGAAGCCTTTCGCAGTTCAAC-GT-TAATTTGGTATGCTCTG 166708 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || |||||||||| |||||||||||||||||||||||||||||||| Sbjct 166707 AGCTATGCATGGCTCAATCTTTGAGACAAGCATATGACTACTGGCAG 166661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510317758720