Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Copidosoma_20floridanum_20[refseq_20GCF_5F000648655.1_202014-05-01] 5,445 sequences; 555,044,930 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq30 125 6e-24 >seq30 Length=3281913 Score = 125 bits (138), Expect = 6e-24 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 61190 AACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGA 61249 |||| ||||| || || ||||| || || || || || || || || |||||||||| Sbjct 991166 AACACTTCATCTCGCACGTATTGGCATTTTTCGCTGCCTCAGATGGCATTGTCAATGAGA 991225 Query 61250 ATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCT 61309 ||||| ||||| | ||| || || || ||||| | ||||| ||||| ||||| || | Sbjct 991226 ATTTAGTGGAAAGGTTCAGTCAAGAAGTACAAGTTACAGAGGCTCGTTGCTTCTATGGTT 991285 Query 61310 TCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACA 61369 |||| |||||||| || || |||| || ||||||||| | ||||||| || || ||| Sbjct 991286 TCCAAATTGCCATAGAAAACATCCATTCAGAGATGTACTCTATTCTCATTGACACTTACG 991345 Query 61370 TCAGGGA 61376 |||| || Sbjct 991346 TCAGTGA 991352 Score = 102 bits (112), Expect = 6e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494 ||||| | ||||| |||| ||||| | || | | |||||||||| ||||| | Sbjct 991487 AAAGCCAACTGGGCTCTCAACTGGATTAGCAATGAGAGCGCTACATTTGCCGAACGTGTT 991546 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || || || | ||||| ||| | ||||||||||| ||||| || || |||||| Sbjct 991547 ATTGCTTTCGCTGCAGTCGAAGGTATCTTTTTCAGTGGCAGTTTTGCAGCTATTTTTTGG 991606 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 |||| || || ||||| ||||| ||||| |||||||| || || | || || ||||| Sbjct 991607 CTGAAAAAGCGAGGACTCATGCCGGGTCTTACCTTCAGTAACGAACTCATCTCTCGCGAT 991666 Query 61615 GAGG 61618 |||| Sbjct 991667 GAGG 991670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397541617014800