Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1952 708 0.0 seq3727 286 1e-74 seq1627 120 1e-24 >seq1952 Length=126965 Score = 708 bits (784), Expect = 0.0 Identities = 486/541 (90%), Gaps = 8/541 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 124211 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 124152 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 124151 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 124092 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | ||||| |||| || ||| | | || | || | || || | |||| |||| Sbjct 124091 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 124033 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 124032 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 123976 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123975 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 123916 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 123915 CTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 123856 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123855 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 123796 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123795 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 123736 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 123735 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCT 123676 Query 543 G 543 | Sbjct 123675 G 123675 >seq3727 Length=75275 Score = 286 bits (316), Expect = 1e-74 Identities = 220/260 (85%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG-AA 232 ||||||| || || |||||||| ||||||| | |||||||||||||| || | || Sbjct 27703 TCCGCTTAATCGAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCAAAGTCGATGTAA 27762 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 || ||||||||||| |||||||||||| ||| |||||| | | |||||||||||||| Sbjct 27763 ACATCTCCCACTTATGCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGC 27822 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 27823 TCAACAGGGTCTTCTTGCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 27882 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 |||| || | |||||||| || |||| ||||||||||| |||||||||||||||| Sbjct 27883 CTAGGTAAAAAATAGGGACGAAGGAGGTCTCATTAATCCATTCGTGCGCGTCACTAATTA 27942 Query 413 GATGACGAGGCATTTGGCTA 432 |||||||||||||||||||| Sbjct 27943 GATGACGAGGCATTTGGCTA 27962 Score = 122 bits (134), Expect = 3e-25 Identities = 99/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 27467 CTTTTGCTCTACGCGAGGTTTCTGTCCTCACTGAGCTGGCCTTAGGACACCTGCGTTATT 27526 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| |||| |||||| Sbjct 27527 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCAAATCGGATC 27586 >seq1627 Length=8551 Score = 120 bits (132), Expect = 1e-24 Identities = 84/96 (88%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||||||||||||| | |||||| ||||||||||||| |||| Sbjct 6197 TAAGAGAGTCATAGTTACTCCCGCCGTTAATAAGCGCTTAAATGAATTTCTTCACGTTGA 6256 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||| ||||||||||||||||||||| ||||| Sbjct 6257 CATTCATTACACTGGGCAGAAATCACATTGTGTCAA 6292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635050281088