Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq2493 71.6 6e-11 seq2400 71.6 6e-11 seq1708 71.6 6e-11 >seq2493 Length=234908 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 54939 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 54997 >seq2400 Length=203731 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 4608 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 4550 >seq1708 Length=65637 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 4362 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 4420 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 13084 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 13142 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 21885 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 21943 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 30652 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 30710 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 39453 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 39511 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 48229 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 48287 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| | ||||| ||| |||||||||| |||| Sbjct 56940 GGAAAAGAAACTAACAAGGATTCCCCGAGTAGCTGCGAGCGAAAAGGGAAGAGCTCAGC 56998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230393150640