Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1708 289 5e-76 seq2911 277 3e-72 seq2989 275 1e-71 seq2926 275 1e-71 seq1419 275 1e-71 seq386 275 1e-71 seq2797 150 3e-34 >seq1708 Length=65637 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 7919 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 7861 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 7860 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 7801 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 7800 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 7741 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 7740 TGTGGTAACTTTTCTGACACCTCTTGC 7714 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 16640 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 16582 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 16581 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 16522 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 16521 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 16462 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 16461 TGTGGTAACTTTTCTGACACCTCTTGC 16435 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 25442 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 25384 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 25383 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 25324 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 25323 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 25264 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 25263 TGTGGTAACTTTTCTGACACCTCTTGC 25237 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 34208 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 34150 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 34149 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 34090 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 34089 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 34030 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 34029 TGTGGTAACTTTTCTGACACCTCTTGC 34003 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 43011 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 42953 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 42952 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 42893 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 42892 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 42833 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 42832 TGTGGTAACTTTTCTGACACCTCTTGC 42806 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 51786 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 51728 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 51727 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 51668 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 51667 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 51608 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 51607 TGTGGTAACTTTTCTGACACCTCTTGC 51581 Score = 289 bits (320), Expect = 5e-76 Identities = 189/207 (91%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 60492 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 60434 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 60433 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 60374 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 60373 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 60314 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||| ||||||| || Sbjct 60313 TGTGGTAACTTTTCTGACACCTCTTGC 60287 >seq2911 Length=531067 Score = 277 bits (306), Expect = 3e-72 Identities = 189/209 (90%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACC-CA-GCTCACGTTCCCT 89 || |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| Sbjct 125289 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCTCACGCTCACGTTCCCT 125348 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | ||||||||||||| |||||| ||||| |||||| |||||||||||||||| Sbjct 125349 -TGAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 125407 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 125408 ACATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATC 125467 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||||| ||||||| || Sbjct 125468 CCTGTGGTAACTTTTCTGACACCTCTTGC 125496 >seq2989 Length=739061 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 431895 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 431837 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 431836 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 431777 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 431776 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 431717 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 431716 TGTAGTAACTTTTCTGACACCTCTTGC 431690 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 443111 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 443053 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 443052 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 442993 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 442992 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 442933 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 442932 TGTAGTAACTTTTCTGACACCTCTTGC 442906 >seq2926 Length=549490 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 297 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 239 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 238 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 179 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 178 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 119 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 118 TGTAGTAACTTTTCTGACACCTCTTGC 92 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 10800 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 10742 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 10741 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 10682 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 10681 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 10622 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 10621 TGTAGTAACTTTTCTGACACCTCTTGC 10595 >seq1419 Length=40499 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 18391 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 18333 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 18332 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 18273 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 18272 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 18213 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 18212 TGTAGTAACTTTTCTGACACCTCTTGC 18186 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 29949 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 29891 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 29890 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 29831 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 29830 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 29771 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 29770 TGTAGTAACTTTTCTGACACCTCTTGC 29744 >seq386 Length=11394 Score = 275 bits (304), Expect = 1e-71 Identities = 186/207 (90%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct 9714 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCATGTTCCCT-T 9656 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 9655 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 9596 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 9595 ATCGAAGGATCAACAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 9536 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGC 238 ||| |||||||||||| ||||||| || Sbjct 9535 TGTAGTAACTTTTCTGACACCTCTTGC 9509 >seq2797 Length=418371 Score = 150 bits (166), Expect = 3e-34 Identities = 89/93 (96%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGT 205 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 323661 GCCGACATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGT 323602 Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||||||||| ||||||| || Sbjct 323601 TATCCCTGTGGTAACTTTTCTGACACCTCTTGC 323569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854372906976