Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq3141 80.6 2e-13 seq3089 80.6 2e-13 seq2989 80.6 2e-13 seq2926 80.6 2e-13 seq2771 80.6 2e-13 seq2751 80.6 2e-13 seq2626 80.6 2e-13 seq2400 80.6 2e-13 seq2018 80.6 2e-13 seq1708 80.6 2e-13 seq1419 80.6 2e-13 seq148 80.6 2e-13 seq2396 75.2 7e-12 >seq3141 Length=1574671 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 237436 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 237381 >seq3089 Length=998639 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 837184 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 837239 >seq2989 Length=739061 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 423442 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 423387 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 436051 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 435996 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 461530 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 461475 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 473873 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 473818 >seq2926 Length=549490 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 4233 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 4178 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 14732 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 14677 >seq2771 Length=403117 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 374509 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 374454 >seq2751 Length=390829 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 389092 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 389037 >seq2626 Length=309630 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 1808 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 1753 >seq2400 Length=203731 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 5868 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 5923 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 7533 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 7588 >seq2018 Length=108674 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 74775 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 74720 >seq1708 Length=65637 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3139 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 3084 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 11874 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 11819 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 20595 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 20540 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 29414 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 29359 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 38217 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 38162 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 46989 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 46934 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 55716 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 55661 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 64501 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 64446 >seq1419 Length=40499 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 22546 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 22491 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 33881 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 33826 >seq148 Length=45634 Score = 80.6 bits (88), Expect = 2e-13 Identities = 54/58 (93%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 11301 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCTAGCT 11356 >seq2396 Length=199446 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| ||||||||||||||||||||| || |||||| |||| Sbjct 196299 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTCAT-CAACGCTAGCT 196354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300791057780