Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2400 116 7e-24 seq1708 116 7e-24 seq2771 107 4e-21 >seq2400 Length=203731 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 6107 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 6049 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 6048 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 5994 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 5993 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 5935 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 5934 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 5892 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 7772 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 7714 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 7713 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 7659 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 7658 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 7600 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 7599 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 7557 >seq1708 Length=65637 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 2900 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 2958 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 2959 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 3013 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 3014 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 3072 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 3073 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 3115 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 11635 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 11693 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 11694 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 11748 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 11749 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 11807 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 11808 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 11850 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 20356 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 20414 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 20415 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 20469 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 20470 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 20528 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 20529 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 20571 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 29175 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 29233 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 29234 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 29288 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 29289 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 29347 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 29348 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 29390 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 37978 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 38036 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 38037 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 38091 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 38092 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 38150 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 38151 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 38193 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 46750 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 46808 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 46809 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 46863 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 46864 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 46922 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 46923 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 46965 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 55477 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 55535 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 55536 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 55590 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 55591 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 55649 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 55650 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 55692 Score = 116 bits (128), Expect = 7e-24 Identities = 162/223 (73%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 64262 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 64320 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| |||| |||| ||| |||| | ||| Sbjct 64321 AATGTGAGCAGCAGCGTGTAC----CCTACGCCGAAAGGCGCGGGAAATC-ACTGAAATG 64375 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 64376 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 64434 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 64435 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 64477 >seq2771 Length=403117 Score = 107 bits (118), Expect = 4e-21 Identities = 160/223 (72%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | ||||| |||| |||||||||||||||||||||||| ||||||||||||| Sbjct 374270 AGATTGAG-CGATAACCGGTCCGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTAC 374328 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | || || || || || | ||| ||| |||| ||| |||| | ||| Sbjct 374329 AATGTGAGCAGCAGCGTGTAC----CCTACGCCAAAAGGCGCGGGAAATC-ACTGAAATG 374383 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 || | | ||||| | |||| || | | | | ||| ||||| || |||||| Sbjct 374384 CTCATTTAGTCGGGATTATGGATTG-AAATGGTCCATATGAACCTGGAATTCCCAGTAAG 374442 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||||| ||| ||||||||||||||||||||||||||| Sbjct 374443 TGCTGGTCATTAGCTAGCGTTGATTACGTCCCTGCCCTTTGTA 374485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947169964288