Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9788 208 1e-51 >seq9788 Length=50654 Score = 208 bits (230), Expect = 1e-51 Identities = 216/292 (74%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11384 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 11325 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117 | |||| || | |||| |||||| |||||||||||||| Sbjct 11324 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 11267 Query 118 ---------AGCCACCAACCATAGTCGATGG----------------------GGCTATT 146 | || || || || || || | ||||| Sbjct 11266 GTAGTAAAAACCCGCCGGCCGGAGCCGGGGGCCTTCGCGATACCATAAGGTACGCCTATT 11207 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 11206 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 11147 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 11146 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 11095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796681289499