Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq15313 75.2 3e-11 seq15278 75.2 3e-11 seq9788 75.2 3e-11 >seq15313 Length=84324 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 77296 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 77354 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| || |||||||||||| || Sbjct 77355 ACTTGTTCGCTATCGGTCTCGTGGTCGTATTTAGCCTTAGA 77395 >seq15278 Length=77882 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 37280 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 37338 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| || |||||||||||| || Sbjct 37339 ACTTGTTCGCTATCGGTCTCGTGGTCGTATTTAGCCTTAGA 37379 >seq9788 Length=50654 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 13585 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 13527 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| || |||||||||||| || Sbjct 13526 ACTTGTTCGCTATCGGTCTCGTGGTCGTATTTAGCCTTAGA 13486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241409054336