Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq7516 84.2 6e-12 >seq7516 Length=421 Score = 84.2 bits (92), Expect = 6e-12 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 12301 GAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAG 12360 |||||||||||||| || |||||||| || ||||| | |||||||| || |||||| Sbjct 413 GAGTGGAAGGACGGCGACGCGCTGTTTATCCGCTGTGACGTGTGGCGCCAGATGGCCGAG 354 Query 12361 AACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCC 12420 || ||||| | ||| |||| ||||||| | || ||||| ||| ||| Sbjct 353 AATGTCGCGTCGTCGTTGCAAAAGGGCCAGCGGGTCGTTGTGACCGGAGCGCTGAAGGTT 294 Query 12421 CGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAG 12480 |||| || ||| | || || |||| | ||| ||||| || |||||||||| Sbjct 293 CGCAATTTTGAGCGTCAAGATGGCTCGAAGGGCACCAGTGTCGAAATGACGGTCGACGAG 234 Query 12481 ATCGGCCCCAGCCTCCGCTACGCCACCGC 12509 |||||||| || |||| ||| || || Sbjct 233 ATCGGCCCGTCGCTGCGCTTCGCTACTGC 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126172153522728