Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_016654.1
Length=39474
Score E
Sequences producing significant alignments: (Bits) Value
seq7516 84.2 6e-12
>seq7516
Length=421
Score = 84.2 bits (92), Expect = 6e-12
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 12301 GAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGCCGCCGAG 12360
|||||||||||||| || |||||||| || ||||| | |||||||| || ||||||
Sbjct 413 GAGTGGAAGGACGGCGACGCGCTGTTTATCCGCTGTGACGTGTGGCGCCAGATGGCCGAG 354
Query 12361 AACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCC 12420
|| ||||| | ||| |||| ||||||| | || ||||| ||| |||
Sbjct 353 AATGTCGCGTCGTCGTTGCAAAAGGGCCAGCGGGTCGTTGTGACCGGAGCGCTGAAGGTT 294
Query 12421 CGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAG 12480
|||| || ||| | || || |||| | ||| ||||| || ||||||||||
Sbjct 293 CGCAATTTTGAGCGTCAAGATGGCTCGAAGGGCACCAGTGTCGAAATGACGGTCGACGAG 234
Query 12481 ATCGGCCCCAGCCTCCGCTACGCCACCGC 12509
|||||||| || |||| ||| || ||
Sbjct 233 ATCGGCCCGTCGCTGCGCTTCGCTACTGC 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126172153522728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |