Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_033316.1
Length=1652
Score E
Sequences producing significant alignments: (Bits) Value
seq9780 95.1 1e-16
>seq9780
Length=231597
Score = 95.1 bits (104), Expect = 1e-16
Identities = 159/223 (71%), Gaps = 8/223 (4%)
Strand=Plus/Plus
Query 457 TAAATCGAACCCTCTGTCGTGAGGAATTCGTATATTATTGTATTCTTTTACTTTGGTTTA 516
|| |||||| |||| ||| |||||| || |||||| | | | ||| | ||| |||
Sbjct 125755 TAGATCGAATCCTCGCTCGCGAGGAACTCTCATATTAAGGGACCGTATTAATGTGGATTA 125814
Query 517 GAATGCTTGAGATAAAGGCTAAACAAAGAGGTGTTGTATTAATAT-CTCAGGAAAAGGAC 575
|| |||| || || || || |||||| | | || |||| | | ||| ||||| |
Sbjct 125815 GACTGCTGGACATCAAAGCGAAACAAGGTGACACTGCGTTAACAAGCGCAGAAAAAG-AT 125873
Query 576 ATTCGAAAAGCAGTTGCAGACTTGACATTT--AATGTTCCGCAACCTATCCAAACGTATC 633
||||| ||||| ||||||||| ||| ||| || || || | ||| | ||| |||||
Sbjct 125874 ATTCGCAAAGCGGTTGCAGAC--GACGTTTTCAACGTCCCACTGCCTCTGCAAGCGTATA 125931
Query 634 TCAGTCAGATTGGAA-ATGTGACAGATAAAATGGGAAAGGAAA 675
||| |||||||| || || |||||| |||||||||||||
Sbjct 125932 TCAACGAGATTGGACCATACGA-AGATAAGATGGGAAAGGAAA 125973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5176753970452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |