Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_033852.1
Length=1766
Score E
Sequences producing significant alignments: (Bits) Value
seq13321 174 2e-40
>seq13321
Length=3386461
Score = 174 bits (192), Expect = 2e-40
Identities = 338/492 (69%), Gaps = 8/492 (2%)
Strand=Plus/Plus
Query 414 AAAGATGAACCACTTTATAACATAGTAAATGGTTCAAGGCCTAACAAAAGATTGTATTCT 473
||| |||||||||| ||| | ||||| ||| ||||| || | |||||| |||||
Sbjct 561956 AAAAATGAACCACTATATGATCTAGTAGCTGGATCAAGACCAGTGAGAAGATTATATTCC 562015
Query 474 GTAAATTTTGATTTTTCGTCCTTTCCCCTGTTGTGTGATATG--ACATACCGCGAGTTAA 531
||||| ||| |||||| ||||| || |||||||| | ||||| | || ||||
Sbjct 562016 CAAAATTGTGACTTTTCGGGTTTTCCACTTTTGTGTGAGACAGTACATA--GAGACTTAA 562073
Query 532 GATTATCCAATCCACGGATTAAAAGAGAAATGCCATTCTGCAGCTTTCTCCATTCAATGA 591
| || |||||| | ||||| | ||| | |||| ||| ||| | || |||||||
Sbjct 562074 AACAGTCAAATCCAAGAATTAAGCGCGAATTACCATATTGCGCTTTTTTACACTCAATGA 562133
Query 592 CCAGCTGTTTGAATGCGTGGATAATCCAGACCGTGAAGAAAATAAACAGCGAAGATAGGT 651
| | ||| | ||||| ||| |||| | | ||||| || | || |||||||| |
Sbjct 562134 CGACATGTCTAAATGCCTGGTTAATTAACAACGTGACTAAGGTTAATTTAGAAGATAGAT 562193
Query 652 TTAGTGAAGAAAGAGATCCCGCTGAACTAATACCGCTTGAGATGTTAATACCTCAACCCA 711
||| || ||| ||| | | ||||||| |||||||||||| |||||||| |
Sbjct 562194 ATAGCGATGAATCGGATTCACTATCATTAATACCAAATGAGATGTTAATCCCTCAACCAA 562253
Query 712 TTGCAGAATACCTATCCCTGGTTAATACAATCGTCACTTCGTCAGGTGATACAGTGAGAG 771
| || |||||| | ||| || | |||||| | | || | || || ||||| | ||||
Sbjct 562254 TAGCTGAATACTTGTCCATGATCAATACAGTAATAACACCTTCTGGAGATACTATTAGAG 562313
Query 772 TTAACTTTCCTGATGCTGGATTACCGCAATTATCAT-TACCGGAAGATGGCGATAAACCA 830
||||| |||| ||| | | | || ||| || || |||| | ||| | | |||
Sbjct 562314 TTAACGTTCCAGATTCATGCGTGCCTCAA-CATAATATACCAGCAGAAGAAGGAAAAGAG 562372
Query 831 GAAGTTCCTCCAGGTAGTTTTGGAGATG-TAACGTCCCAGAATCATAATGCCTACGAGTG 889
| | || ||||| |||||||| |||| | ||| | |||||||||||| | || || ||
Sbjct 562373 GCTATACCACCAGGAAGTTTTGGTGATGCTGACG-CACAGAATCATAATACTTATGAATG 562431
Query 890 CTACGTGTCTCC 901
|| || |||||
Sbjct 562432 TTATGTTTCTCC 562443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5541494361448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |