Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq249 95.1 1e-17 seq843 87.8 2e-15 seq917 86.0 6e-15 seq20 86.0 6e-15 >seq249 Length=9465 Score = 95.1 bits (104), Expect = 1e-17 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| ||||||| |||| |||| Sbjct 6632 GGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATAAGCGTCGGG 6573 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || || |||| |||||||| ||| ||||||||||||||||| Sbjct 6572 GAGGTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGCAACCC 6526 >seq843 Length=2902 Score = 87.8 bits (96), Expect = 2e-15 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66 |||||||||||| ||| || ||||||| |||||||||| || ||||||| |||| || Sbjct 1784 CGGTGGATGCCTTGGCGCTGAGAGGCGATGAAGGACGTGCTACGCTGCGATAAGCCGTGG 1725 Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 ||| || | | | ||||||| | ||| ||||||||||| ||||| Sbjct 1724 GGAGCTGCGAAGAAGCTTTGATCCATGGATTTCCGAATGGGGAAACCC 1677 >seq917 Length=2224 Score = 86.0 bits (94), Expect = 6e-15 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| || | | || ||| |||||||| ||| | |||||| ||||| |||| Sbjct 581 GGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCGGG 522 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATT 122 || | | ||| | |||||||| |||| ||||||||||| ||||| ||| || Sbjct 521 GAGCTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTT 467 >seq20 Length=12842 Score = 86.0 bits (94), Expect = 6e-15 Identities = 129/177 (73%), Gaps = 10/177 (6%) Strand=Plus/Plus Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69 ||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| ||| | Sbjct 9501 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGTGGGAA 9560 Query 70 -TTGGCACATACGAATT--GATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGGA 125 ||| || || |||| |||||| |||| ||||||||||| ||||| | || || | Sbjct 9561 ATTGTCA---ACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGC 9617 Query 126 GATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | ||| || | ||| | | | || ||| ||| ||||||||| ||||||||| Sbjct 9618 TAGTTATTAT-ATACTAAGTATATAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 9673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476793076119