Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq249 360 5e-97 seq966 354 2e-95 seq917 279 1e-72 seq1212 273 6e-71 seq67 174 4e-41 >seq249 Length=9465 Score = 360 bits (398), Expect = 5e-97 Identities = 322/401 (80%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 8460 AGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTT 8401 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||| ||||||||||||||||| || |||||| | |||| |||| ||||||||| Sbjct 8400 GTTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGACTTTTAAGTCAGGGGTGAAATCC 8341 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||||| |||| |||| ||| |||| |||| | | || |||| || ||||| | || Sbjct 8340 CGGGGCTCAACCCCGGAACTGCCTTTGATACTGGAAGTCTTGAGTATGGTAGAGGTGAGT 8281 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| |||||||||||| |||||||||| Sbjct 8280 GGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGC 8221 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | |||| | ||||||||| | | ||||||||||||||||||||||||||||| Sbjct 8220 GGCTCACTGGACCATTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 8161 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGA-TTTACTTCCTTG 368 ||||||||||||||||||| |||||||| ||| |||||||| |||||| | | | Sbjct 8160 TACCCTGGTAGTCCACGCCGTAAACGATGAATGTTAGCCGTTGGGGAGTTTACT-CTTCG 8102 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||||||||| | || ||||||||||| ||| Sbjct 8101 GTGGCGCAGCTAACGCATTAAACATTCCGCCTGGGGAGTAC 8061 >seq966 Length=90452 Score = 354 bits (392), Expect = 2e-95 Identities = 325/408 (80%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | |||| |||| |||||||||| |||||||||||||||||||||||| |||| || Sbjct 88939 TACCCGGAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGC 88998 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||| ||||||||||||||||||||| | ||| |||||| | |||| |||| || Sbjct 88999 TAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTAGGCGGACATTTAAGTCAGGGGT 89058 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||||||| ||||| ||||| |||||||| |||| |||| | || |||| || ||| Sbjct 89059 GAAATCCCGGGGCTCAACCTCGGAATTGCCTTTGATACTGGGTGTCTTGAGTATGAGAGA 89118 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| ||| |||||| ||||||| ||||||||| ||| |||||||| ||| Sbjct 89119 GGTGTGTGGAACTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGG 89178 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||| | | |||| | ||||||||| | || |||||||||||||||||||||| Sbjct 89179 CGAAGGCGACACACTGGCTCATTACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAG 89238 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTT-GGGGATTTAC 361 |||||||||||||||||||||||||| |||||||| | || ||| | || ||||| Sbjct 89239 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATGCCAGCCGTTAGTGGGTTTAC 89298 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || | || || ||||||||| | ||| ||||||||||| ||| Sbjct 89299 -TCACTAGTGGCGCAGCTAACGCTTTAAGCATTCCGCCTGGGGAGTAC 89345 >seq917 Length=2224 Score = 279 bits (308), Expect = 1e-72 Identities = 264/336 (79%), Gaps = 1/336 (0%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||||| | | |||| |||||||||| |||||||||||||||||||||| |||| | Sbjct 1842 ATACCTTACCAGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTGG 1783 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||||||| |||| ||| ||||||||||||||||| || ||||| || ||| | | Sbjct 1782 CAAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGA 1723 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | |||| ||||| |||| || || || | ||| || |||||||| | || Sbjct 1722 TTAAATTTAGGGGCTCAACCCCT-AACCGCCTTGGAAACTACATTACTAGAGTATAGGAG 1664 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| |||||||| || ||||||| ||| ||||||||||||| || |||||||||| || Sbjct 1663 AGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTG 1604 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| || |||| || ||||||| | |||||||||||||||||||||| | Sbjct 1603 GCGAAGGCGGCTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGGAGCAAATA 1544 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||| |||||||||||| |||||||| Sbjct 1543 GGATTAGATACCCTAGTAGTCCACGCCGTAAACGAT 1508 >seq1212 Length=36954 Score = 273 bits (302), Expect = 6e-71 Identities = 301/400 (75%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 1406 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 1465 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||| ||||||||||| | ||| |||| | | |||| | ||||||||| Sbjct 1466 ATTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGGTTAATAAGTTAAAAGTGAAATCC 1525 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | |||||||||| |||||||| ||| ||| |||||| || ||||| | Sbjct 1526 CGAGGCTTAACCTTGGAATTGCTTTTAAAACTATTAATCTAGAGATTGAAAGAGGATAGA 1585 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| ||||| || |||| |||| |||| |||||||||||| |||||||||| Sbjct 1586 GGAATTCCTGATGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 1645 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | |||| || |||||||| | || |||| |||||||||||||||||||||||| Sbjct 1646 GTCTATCTGGTTCAAATCTGACGCTGAAGCGCGAAGGCGTGGGGAGCAAACAGGATTAGA 1705 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| || | | || ||||||| || | Sbjct 1706 TACCCTGGTAGTCCACGCTGTAAACGATGAATGTTAAATATGGGAAGTTTACTTTCT--G 1763 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||| || ||||||||||| ||| Sbjct 1764 TATTACAGCTAACGCGTTAAACATTCCGCCTGGGGACTAC 1803 >seq67 Length=373 Score = 174 bits (192), Expect = 4e-41 Identities = 146/179 (82%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 159 ACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGT 218 ||| || |||||||| | ||||| |||||||| || ||||||| ||| ||||||| Sbjct 61 ACTACATTACTAGAGTATAGGAGAGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCGT 120 Query 219 AGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATG 278 |||||| || |||||||||| ||||||| || || |||| || ||||||| | | Sbjct 121 AGATATATGAAGGAACACCAGTGGCGAAAGCGGCTAACTGGCCTATTACTGACGTTGTGG 180 Query 279 CACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| Sbjct 181 CACGAAAGCGTGGGGAGCAAATAGGATTAGATACCCTAGTAGTCCACGCCGTAAACGAT 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289580668896