Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq20 129 6e-28 seq843 102 8e-20 seq249 102 8e-20 >seq20 Length=12842 Score = 129 bits (142), Expect = 6e-28 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||| Sbjct 11134 GCGACTGTTTACTAAAAACACAGGACTCTGCAAACACGTAAGTGGAAGTATAGGGTCTGA 11193 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAAT 153 |||||||||||||| ||||||||||| Sbjct 11194 CGCCTGCCCGGTGCTGGAAGGTTAAT 11219 >seq843 Length=2902 Score = 102 bits (112), Expect = 8e-20 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | || |||||||| |||||||||| |||||| || || ||| ||||| Sbjct 107 ACCAGGGGGTGGCAACTGTTTAACAAAAACACAGGGCTCTGCGAAATCGCAAGATGACGT 48 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| |||||||||||||||||||||||||||| Sbjct 47 ATAGGGTCTGACGCCTGCCCGGTGCCGGAAGGTTAA 12 >seq249 Length=9465 Score = 102 bits (112), Expect = 8e-20 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||| |||||||||| |||||| || || ||| ||||| Sbjct 4964 ACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 4905 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| ||||||||||||||||| |||||||||| Sbjct 4904 ATAGGGTCTGACGCCTGCCCGGTGCTGGAAGGTTAA 4869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476793076119