Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq917 513 4e-143 seq249 493 4e-137 seq966 470 4e-130 seq1212 453 3e-125 seq843 131 5e-28 seq67 109 2e-21 >seq917 Length=2224 Score = 513 bits (568), Expect = 4e-143 Identities = 412/492 (84%), Gaps = 10/492 (2%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 1379 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCC-CTCTAGAG 125 ||||||||||||||||||| |||||||||| ||||||||| | || || ||||| Sbjct 1378 TAATTCGAAGCAACGCGAAAAACCTTACCAGGTCTTGACATACCTTGCGAAGCTATAGAG 1319 Query 126 ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGT 185 ||| || | || ||| | ||||||| ||||||||||||||||| |||| Sbjct 1318 ATATAG--TAGAGATTA-----ACAAGGATACAGGTGGTGCATGGTTGTCGTCAGTTCGT 1266 Query 186 GTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCA 245 ||||||||||||| |||||||| | ||||||| |||||||||| ||||||||||| || Sbjct 1265 GTCGTGAGATGTTTGGTTAAGTTCAGCAACGAACGCAACCCTTGTCCTTAGTTGCCAGCA 1206 Query 246 TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGT 305 |||||||||| |||||||| |||||| ||| || | |||||||||||||||||||| Sbjct 1205 TTAAGTTGGGGACTCTAAGGAGACTGCTAGTGT-AAGCTAGAGGAAGGTGGGGACGACGT 1147 Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 1146 CAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGCTGATACAAAGA 1087 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | || |||||||||||||||||||||| || ||||| ||||||| ||||||| |||| Sbjct 1086 GTCGCTAAACCGCGAGGTCAAGCAAATCTCAAAAAGTCAGTCTCAGTCCGGATTGAAGTC 1027 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTG 484 |||||||||||| |||||| ||||||||||||||||| |||||| ||| ||||| Sbjct 1026 TGCAACTCGACTTCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCAATGTCGCGGTG 967 Query 485 AATACGTTCCCG 496 ||||||||| || Sbjct 966 AATACGTTCTCG 955 >seq249 Length=9465 Score = 493 bits (546), Expect = 4e-137 Identities = 416/501 (83%), Gaps = 10/501 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 8063 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 8004 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCC--- 117 ||||||||||||||||||||||| |||||||||||| |||||||| | | | | | Sbjct 8003 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCCCTTGACATAC-CGGTCGCGGA 7945 Query 118 CTCTAGAGATAGAGGTTTCCCCTTCGGG-GGACAGAGTGACAGGTGATGCATGGTTGTCG 176 | | |||||| | | || | ||||| |||| | | ||||||| ||||||| ||||| Sbjct 7944 CAC-AGAGAT-GTGTCTTTCAGTTCGGCTGGACCGGAT-ACAGGTGCTGCATGGCTGTCG 7888 Query 177 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAG 236 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 7887 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCCTTAG 7828 Query 237 TTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||||| |||| |||||||||||||||| |||||||||||| || ||| |||||||||| Sbjct 7827 TTGCCAGCATTTAGTTGGGCACTCTAAGGGGACTGCCGGTGATAAGCCGAGAGGAAGGTG 7768 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||| |||||||| || ||||| |||||| | |||||||||||||||||||||||| Sbjct 7767 GGGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGTG 7708 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||| ||||||||| |||||| ||| |||| | |||| |||||||||| Sbjct 7707 GTGACAGTGGGCAGCGAGCACGCGAGTGTGAGCTAATCTCCAAAAG-CCATCTCAGTTCG 7649 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 ||||| | |||||||||||| | |||||| |||||||||||||||||| ||||||||| Sbjct 7648 GATTGCACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCAT 7589 Query 476 GCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 7588 GCCGCGGTGAATACGTTCCCG 7568 >seq966 Length=90452 Score = 470 bits (520), Expect = 4e-130 Identities = 401/496 (81%), Gaps = 24/496 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 89343 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 89402 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||| |||||||||||| | ||||||| | |||| | Sbjct 89403 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCACCTTTTGACATGCCTGGACCGCCA 89462 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| | |||||| ||||||| || | ||||||| ||||||| ||||||||| Sbjct 89463 GAGAGATCTGGCTTTCCC-TTCGGGGACTAG-GACACAGGTGCTGCATGGCTGTCGTCAG 89520 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 89521 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCATTAGTTGC 89580 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| ||||||| ||||||| ||||||||||| || ||||||||||||||||| Sbjct 89581 CATCATTTAGTTGGGAACTCTAATGGGACTGCCGGTGCTAAGCCGGAGGAAGGTGGGGAT 89640 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| || ||||| |||||| |||||||||||||||||||||||| | ||| Sbjct 89641 GACGTCAAGTCCTCATGGCCCTTACAGGGTGGGCTACACACGTGCTACAATGGCGACTAC 89700 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 | ||| | ||||| ||||| | ||||||||||||||| Sbjct 89701 AGAGG---------------------GTTAATCCTTAAAAGTCG-TCTCAGTTCGGATTG 89738 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 | |||||||||||| |||||| |||||||||||||||||| ||||||||||| | Sbjct 89739 TCCTCTGCAACTCGAGGGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGC 89798 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 89799 GGTGAATACGTTCCCG 89814 >seq1212 Length=36954 Score = 453 bits (502), Expect = 3e-125 Identities = 411/507 (81%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1801 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 1860 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCCCT 119 |||||||||||||| |||||||||| |||||||||| ||||||||| | | ||| Sbjct 1861 GTGGTTTAATTCGATGCAACGCGAAAAACCTTACCACTTCTTGACATGGAAATCATACCT 1920 Query 120 CT----AGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG---ACAGGTGATGCATGGTT 172 | || ||||| ||| | ||||| | || | ||| ||| ||||||| | Sbjct 1921 ATTCGAAGGGATAG-GGT---CGGTTCGGCCG---GATTTTACACAAGTGTTGCATGGCT 1973 Query 173 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1974 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCC 2033 Query 233 TTAGTTGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGA 290 |||||||| |||| ||| | || | ||| |||| |||||| |||| || | |||||| Sbjct 2034 TTAGTTGCTATCAGGTAATGCTGAGTACTTTAAGGAAACTGCCAGTGATAAGCTGGAGGA 2093 Query 291 AGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAA 350 ||||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct 2094 AGGTGGGGATGATGTCAAGTCATCATGGCCTTTATGGAGTGGGCTACACACGTGCTACAA 2153 Query 351 TGGACAATACAAAGGGCAGCGAAAC-CGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTC 409 ||| ||||| |||| || | ||| || |||| |||||| |||| | ||| Sbjct 2154 TGGTGTCTACAATGGGCTGCAAGGTGCGCAAGCCTAAGCTAATCCCTAAAAGACAT-CTC 2212 Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 ||||||||||||| |||||||||||| || |||||| ||||||||||||||||||| ||| Sbjct 2213 AGTTCGGATTGTACTCTGCAACTCGAGTACATGAAGTTGGAATCGCTAGTAATCGTGGAT 2272 Query 470 CAGCATGCTACGGTGAATACGTTCCCG 496 |||||||| ||||||||||||||| || Sbjct 2273 CAGCATGCCACGGTGAATACGTTCTCG 2299 >seq843 Length=2902 Score = 131 bits (144), Expect = 5e-28 Identities = 98/114 (86%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 383 TCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATG 442 || |||||||| || |||| || |||||||||||||| |||||||||||| ||| Sbjct 2883 TCTAGCAAATCTCAAAAAGCCGT-CTCAGTTCGGATTGGGCTCTGCAACTCGAGCCCATG 2825 Query 443 AAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 2824 AAGTTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCG 2771 >seq67 Length=373 Score = 109 bits (120), Expect = 2e-21 Identities = 63/65 (97%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 368 Query 67 TAATT 71 ||||| Sbjct 369 TAATT 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503977455040