Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq850 167 4e-39 >seq850 Length=2830 Score = 167 bits (184), Expect = 4e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| | |||||||||||||||||||||||||||||| ||| |||||||| Sbjct 1527 CTAGTTAGCAGGACAGAGTCTCGTTCGTTATCGGAATTAACCAGACAGATCGCTCCACCA 1468 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 1467 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 1411 Score = 104 bits (114), Expect = 4e-20 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||| || || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1952 TACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1893 Query 61 ACCTGTTATTGC 72 ||||||||| || Sbjct 1892 ACCTGTTATCGC 1881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796788429219